Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq313 131 4e-26 >seq313 Length=28640 Score = 131 bits (144), Expect = 4e-26 Identities = 459/700 (66%), Gaps = 30/700 (4%) Strand=Plus/Plus Query 33198 AACGGCGACATGGTGGGCTACACGC-TGGAATACGTGGTTGAAATGCAGGTTGACGGCGG 33256 ||||||||||| |||||| ||| | ||||||||| | || || | ||||||| Sbjct 19194 AACGGCGACATCAACGGCTAC-CGCGTCGAATACGTGATCGAGCTGAACACCGACGGCGC 19252 Query 33257 GAGCTGGCAGCAGGTGCTGAAAACGGCGGTATCCGGCAAAACCACC-AGCGGCTACGAGC 33315 ||| ||| ||||||| || ||| | |||||| |||||| |||| ||| || Sbjct 19253 CGGCTACCAGACGGTGCTGTCGACCGCGTTCGACGGCAAGACCACCCAGCG-CTATACGC 19311 Query 33316 GGAGCCACCGCATTGATTTACCGGCCG---GTAAAACGTGGAACCTTCGCCTGCGCAGGC 33372 | |||||||| || | ||| || | | |||| | | ||| ||||| | Sbjct 19312 GCTCGCACCGCATCGAGCTGCCGCGCGCGCGCCAGGGCTGGACCGTGCGCGTGCGCCGCG 19371 Query 33373 TCACCCCGAACGCGAACAGCG-CACGCATCGGCGACACCATGATGCTGGAAAGCTACACC 33431 | || || ||||| |||||| ||| |||| ||| || || |||| | |||| Sbjct 19372 TGACGCCCAACGCCAACAGCAACAC-CATCTCGGACCGCACCGTGGTGGACACGGTCACC 19430 Query 33432 ACCATTATTGACGCGAAGCTGCGCTATCCGAACACCGCCTTACTCTACATGGAATTTGAT 33491 || | ||||| |||||||||||||||| | || | | ||| | | || Sbjct 19431 GAGATCGTCGACGCCAAGCTGCGCTATCCGATGTCGGCGCTGGTGGGCATCAAGATCGAC 19490 Query 33492 TCGAGCCAGTTTAACGGCTCTATTCCGCAAATCTCCTGCGAGCC----GCGCGGGCGTGT 33547 || ||||| | || ||||| || | | ||| || |||||| || | Sbjct 19491 GCGTCGCAGTTCCAGAGC---ATTCC-CA---CCCGCGCGTACCACGTGCGCGGCCGCAT 19543 Query 33548 CATTCGCGTTCCTGCGAACTATGACCCCGACACCCGCAGCTATACCGGCACCTGGGATGG 33607 ||| || || || | |||||| |||| ||| ||| ||||| |||| ||||| || Sbjct 19544 CATCCGGGTGCCGTCCAACTATCACCCGGACCTGCGCCGCTATGACGGCGTGTGGGACGG 19603 Query 33608 CACGTTTAAATGGGCGTGGACGGATAACCCGGCCTGGGTGTTTTACGACCTGGTGATCAC 33667 ||| || || ||| ||||| | ||||||||||||||||| |||||||| | | || Sbjct 19604 CACCTTCAAGCTGGCCTGGACCAACAACCCGGCCTGGGTGTTCTACGACCTCATCAGCAA 19663 Query 33668 TGATCGCTTCGGACTCGGCGACCGGCTGGACGCCGATAACG-TGGACAAATGGGCGCTCT 33726 || |||| || || ||| || || | || || | ||||||| |||| || | Sbjct 19664 CGACCGCTATGGCCTGGGC-ACGCGCGTGCCGGCGGGCTGGCTGGACAAGTGGGGCCTGT 19722 Query 33727 ACCAGGTGGCGCAATACTGCGATCAGATGGTGCCGGACGGCAGGGGCGGCGACGGCAAAG 33786 ||||| | | | || ||||| ||||||| ||| ||| || ||| || | Sbjct 19723 ACCAGATCGGCCGCTATTGCGACGAGATGGTCGATGAC------GGCTTCGGCGGAAAGG 19776 Query 33787 AGCCACGCTATATGTGCAACGTCTACGTGC-AGAGCCGGGCCGACGCATTCACGGTTTTG 33845 | || |||| | |||||||||||| ||| | || | ||||||||| | | ||| || Sbjct 19777 AACCGCGCTTCACCTGCAACGTCTACCTGCAACAGGC-GGCCGACGCCTACCGGGTGGTG 19835 Query 33846 CGCGACTTTGCGGCCATCTTCCGGGGCATGACTTACTGGG 33885 | ||||| || |||| ||||| |||||| |||| |||| Sbjct 19836 CAGGACTTCGCCTCCATTTTCCGCGGCATGGCTTATTGGG 19875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127783060973568