Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_018836.1 Length=50255 Score E Sequences producing significant alignments: (Bits) Value seq706 293 7e-75 >seq706 Length=18769 Score = 293 bits (324), Expect = 7e-75 Identities = 416/577 (72%), Gaps = 11/577 (2%) Strand=Plus/Minus Query 39402 TCACGGTGCGACCCTGCCGTTCTTCACGTACGCGGCGTGAGTGAGGGGCATGTGC-CGGG 39460 ||| || ||||| | |||||| | |||||||||| |||||||||||| || || | Sbjct 3286 TCAGGGGGCGACGCGCCCGTTCGCGGTGAACGCGGCGTGCGTGAGGGGCATGAGCTCGCG 3227 Query 39461 CGAAGTGCTCCTCCATCTGCTCGGCCGCCATCTCGATCTCGCGCTGCGGGAACGAGGGGA 39520 | | || | ||||||||||||| || |||||||||||| |||||||||||||| |||| Sbjct 3226 CCA-GTACGCCTCCATCTGCTCCGCGCACATCTCGATCTCACGCTGCGGGAACGACGGGA 3168 Query 39521 ACCGCGCGGCCTCCGCGGTGGTGCGCAGGCTCAGGAAGTGCATCAGGCTGCGGGCGTTGC 39580 |||| | | |||| | |||||||||| ||||||| |||||| |||||||||| Sbjct 3167 ACCGAGTGCCCTCGACCTTGGTGCGCAGCGAGAGGAAGTTCATCAGCGAGCGGGCGTTGA 3108 Query 39581 AGGTGGCGAAGAACGAGGTGTACGTACCGACGGGGAGGGCGGAGCGGGCGACCTCGCGGG 39640 || || | | ||| | ||| | | || || || ||| |||||||| |||| Sbjct 3107 CCGTCACGTACATCGACGAGTAGATGTTCAGCGGCAGCACGATGCGCGCGACCTCACGGG 3048 Query 39641 CGATGCCGGCCCGGAGCATCACCTGGTAGGCGTTCCAGGCGTGGCGGTAGCTCTCGCGGG 39700 ||| ||| ||| |||||| ||| ||||| | ||||| ||| | | || | Sbjct 3047 CGACGCCCGCCTCGAGCATGCGCTGATAGGCCTCGAAGGCG--GCGATCGAGGCGGCCCG 2990 Query 39701 CGACGTCCCG--CATCACGTTGTACTGGAGCGGGGTGCCCGGCTCGAACCGGTAGGCGCC 39758 | |||| || || || | ||| | |||| || |||| ||| ||||| Sbjct 2989 AGTCGTCTCGGCCACCAGCGCGACCTGCTCGTCGCTGCCGGGGAGGAACTCGTACGCGCC 2930 Query 39759 AGGCTTGCCGACCTGCTGGAGGTTGCGGTCCTCGGCCGGG-ATGTAGAACACCGGCTTCA 39817 ||||||||||||||| | |||||||| || ||||||| | |||||||||||| || Sbjct 2929 GGGCTTGCCGACCTGCAGCAGGTTGCGCTCGG-GGCCGGGCACGTAGAACACCGGACGCA 2871 Query 39818 ACTCCCGGTAGCGCGCTGACTCCTCGTTGTAACTCCAGCCCACCCTGTGACGCATCCACT 39877 ||| |||||||| | |||||||||||||| ||| | | | ||| ||||| ||| Sbjct 2870 GCTCGCGGTAGCGGCCCGACTCCTCGTTGTAGCTCGCG---ATGCGGTGGCGCATGAACT 2814 Query 39878 CACGGGCCACGAACATGGGGGCCTGGACCAGGAAGGTCATCGAGTTGTGCTCGAAGGGGC 39937 | ||| |||||| ||||| ||||| || |||||| | ||||||||||||||| || Sbjct 2813 CGCGGAACACGAAGATGGGCGCCTGCACGTAGAAGGTGAGCGAGTTGTGCTCGAACGGCG 2754 Query 39938 TGCCGTGCCGGTCCCGCATCAGGTAGTTGATCAGGCC 39974 |||||| ||||| ||||||||||||||||| ||||| Sbjct 2753 AGCCGTGACGGTCGCGCATCAGGTAGTTGATGAGGCC 2717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160679135940246