Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_018848.1 Length=37612 Score E Sequences producing significant alignments: (Bits) Value seq5 167 6e-37 >seq5 Length=148305 Score = 167 bits (184), Expect = 6e-37 Identities = 306/446 (69%), Gaps = 12/446 (3%) Strand=Plus/Minus Query 235 CTGTTCGGGCCCCTCGCCCGACTGGTCGTGCAC---ACCCGCGGGGCGACCACGGCGACG 291 |||||||| || ||||| || || ||||||| ||| ||| ||| | || |||| | Sbjct 26732 CTGTTCGGTCCGCTCGCACGGCT---CGTGCACTACACCGCCGGAGCGCCGACAGCGAAG 26676 Query 292 ATCCTCGGCCGCACCGTGCACCTGATCGGCGCCGCCGACGCCCGAGCCGAGGGCCGCCTA 351 ||||||||||||||||||||| | ||||||| ||| || ||||| || Sbjct 26675 ATCCTCGGCCGCACCGTGCACGTCCTCGGCGCGAACGATGCGAAGTCCGAGAAGGTGCTC 26616 Query 352 CGTGGCCTTACCGCCCAGCTCGCCTACGTCGACGAGGCGACCCTCTTGCCCGAGGCGATG 411 || ||||| |||| | |||||||||||||||||||| ||| || | ||||||| | | Sbjct 26615 CGCGGCCTCACCGTCGCGCTCGCCTACGTCGACGAGGTCACCGTCATCCCCGAGGAGTTC 26556 Query 412 TGGACGCAGCTACTCGCCCGCCTGTCCGTGCCCGGGGCGCGCCTCTACGCCACGACGAAC 471 | |||||||| |||| |||| |||| ||| | ||| || | || ||| |||||| Sbjct 26555 TTCACGCAGCTCCTCGGCCGCATGTCGCCGCCACGAGCGAAACTGTTCGGCACCACGAAC 26496 Query 472 CCGGACAGCCCCCGGCACTGGCTACGGACGCAGTACCTCGACCGGGTCGACGAGCCCGAC 531 |||||| || ||||||||| | || ||| ||||||||| ||| | | |||| Sbjct 26495 CCGGACTCGCCGGCGCACTGGCTGAAGGCGAAGTTCCTCGACCGCATCGGC---CGCGAC 26439 Query 532 ATGGAC---CTGCACGAGTGGCATTTCCGCCTCGCCGACAACCCCAGCTTGTCGCCGAAG 588 ||| | || |||||| ||| |||| ||||||||| | | | | | Sbjct 26438 CTGGCCGGGTGGCGGTCGTGGCACTTCACGCTCGACGACAACCCGGCCCTCGAGGAGTCG 26379 Query 589 TACATAGCGTCGCTCGCCGCCGAGTACACCGGCCTATGGCGCCGGCGCATGATCGACGGC 648 || | ||| | || ||||||| ||| ||||| ||| ||| || | | | ||| Sbjct 26378 TATAAGGCGCAGATCAAGGCCGAGTTCACGGGCCTCTGGTACCGCCGATTCGTGCAGGGC 26319 Query 649 GCATGGGTCGTCGCCGAGGGCGCCAT 674 | ||||| | |||||||||||| || Sbjct 26318 GAGTGGGTGGCCGCCGAGGGCGCGAT 26293 Score = 138 bits (152), Expect = 3e-28 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 30166 CTGATGGCCGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCGAACTC 30225 ||||||||||| || ||| |||||||| ||||||||| || ||||||||||| || Sbjct 31316 CTGATGGCCGGCGAGACCGTCATCACCGTCGTGGGCAACCTCACGGCCGACCCCGAGCTG 31257 Query 30226 AGGTTCACCCCCGCCGGCGCCGCC-GTCGCGAACTTCCGGCTCGCCTCGACCCCCCGCAC 30284 ||| ||| | ||| || ||| |||||||||||| |||| |||||||||||||| Sbjct 31256 CGGTACACGCAGAACGG-GCTGCCCGTCGCGAACTTCACCATCGCGTCGACCCCCCGCAC 31198 Query 30285 GTTCGACCGCACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGTCTCCGT 30344 ||||||||| || ||||| ||| ||||||||| ||||||||||| | || || Sbjct 31197 GTTCGACCGTCAGGCGAACGAGTGGAAGGACGGCGAGGCCCTGTTCCTGCGGGCGTCGGT 31138 Query 30345 ATGGCGCCAGCAGGCCGAGAACGTCGCCGGATC 30377 ||||| || |||||| |||| || || || Sbjct 31137 CTGGCGTGAGTTCGCCGAGCACGTGGCGGGTTC 31105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120225378931812