Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1176 82.4 6e-11 seq12 82.4 6e-11 >seq1176 Length=13603 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 48536 GTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATC 48595 || |||||| | || |||| ||||| || || ||| ||| || || || ||||| || Sbjct 12491 GTTGCCGCCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 12550 Query 48596 AGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGT 48655 || || | || | || |||| |||||| || ||||| ||||| ||||| || || | Sbjct 12551 AGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGG 12610 Query 48656 GGGAACGCCCTCCTTGTC 48673 |||| |||||||||||| Sbjct 12611 AGGAATGCCCTCCTTGTC 12628 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || |||| ||||| || || ||| ||| || || || ||||| |||| Sbjct 13253 GCCGCCGCGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 13312 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| |||||| || ||||| ||||| ||||| || || | ||| Sbjct 13313 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGGGG 13372 Query 48659 AACGCCCTCCTTGTC 48673 | |||||||||||| Sbjct 13373 GATGCCCTCCTTGTC 13387 >seq12 Length=84225 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || || | |||||| || || ||| ||| ||||| || ||||| |||| Sbjct 45 GCCGCCACGCAGGCGAAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 104 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || || | |||||| || ||||| ||||| ||||| || || | || Sbjct 105 CAGGGTGCGCCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGG 164 Query 48659 AACGCCCTCCTTGTC 48673 || |||||||||||| Sbjct 165 AATGCCCTCCTTGTC 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380900463226677