Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_019414.1 Length=51071 Score E Sequences producing significant alignments: (Bits) Value seq706 279 2e-70 >seq706 Length=18769 Score = 279 bits (308), Expect = 2e-70 Identities = 515/743 (69%), Gaps = 43/743 (6%) Strand=Plus/Minus Query 39250 GCGGCTTGC-TCACGGGGCCACCCGGCCCTGCTTGTTGAAGGCGGTGTACGTGATGGGCA 39308 ||||| | | ||| ||||| || || || | | | |||| |||| || ||||| ||||| Sbjct 3296 GCGGCATCCGTCAGGGGGCGACGCGCCCGTTCGCGGTGAACGCGGCGTGCGTGAGGGGCA 3237 Query 39309 TCAGGTC-CGCGAGGTGGTCCTCCATCTTCTCGGCGACCATCTCGATCTCGCGCTGCGGG 39367 | || || ||| || | ||||||||| ||| ||| |||||||||||| ||||||||| Sbjct 3236 TGAGCTCGCGCCAGTACG-CCTCCATCTGCTCCGCGCACATCTCGATCTCACGCTGCGGG 3178 Query 39368 AAGGAGGGGAACTGAGCGA--TGGCACTGATGGTGCGGAGTCCGAGGAAGTGCATCAGGC 39425 || || |||||| ||| | | | || ||||||| || |||||||| |||||| Sbjct 3177 AACGACGGGAACCGAGTGCCCTCGACCT--TGGTGCGCAGCGAGAGGAAGTTCATCAGCG 3120 Query 39426 TGCGCGCGTTGCAGGTGGCGTAGAAGCTGGTGAAGATCCCGACCGGGAGGACCATGCGGG 39485 ||| |||||| || |||| | | | |||| | ||| || || ||||| | Sbjct 3119 AGCGGGCGTTGACCGTCACGTACATCGACGAGTAGATGTTCAGCGGCAGCACGATGCGCG 3060 Query 39486 CCACCTCGCGGGCGATGCCGATCTCCAGCATCACCTCGTAGGAGCGGTACGCCT-GCTCG 39544 | ||||| ||||||| ||| ||| ||||| || |||| | | || | ||| Sbjct 3059 CGACCTCACGGGCGACGCCCGCCTCGAGCATGCGCTGATAGGCCTCGAAGGCGGCGATCG 3000 Query 39545 TACGCGTCAC---TCATGGCGGAGAGCGTCACCGCGTACTGCGAGGGCGAGCCGGGCGTG 39601 | ||| | | || | ||| | | | |||| |||| | |||||| | Sbjct 2999 -AGGCGGCCCGAGTCGTCTCGGCCACC---AGCGCGACCTGCTCGTCGCTGCCGGGGAGG 2944 Query 39602 AACTGGTAGGCGCCGGGCTTGCCCTTCTGCACCAGGTTCCGCTCATGGCCGGGGGCGTAG 39661 |||| ||| |||||||||||||| ||||| |||||| ||||| ||||||| ||||| Sbjct 2943 AACTCGTACGCGCCGGGCTTGCCGACCTGCAGCAGGTTGCGCTCGGGGCCGGGCACGTAG 2884 Query 39662 AAGACGGGGCGGAGCTGCTTGTAGCGGCCCGACTCCTCGTTGTACGACCAGCCCGA-GCG 39720 || || || || |||| |||||||||||||||||||||||| | ||| ||| Sbjct 2883 AACACCGGACGCAGCTCGCGGTAGCGGCCCGACTCCTCGTTGTAGCTCG----CGATGCG 2828 Query 39721 GTGGCGGAAGAACTCGCGGGCCACGAAGACCGGCGCCTCGACGTAGAAGGTGAACGTGGT 39780 |||||| | |||||||||| |||||||| ||||||| ||||||||||||| || | | Sbjct 2827 GTGGCGCATGAACTCGCGGAACACGAAGATGGGCGCCTGCACGTAGAAGGTGAGCGAGTT 2768 Query 39781 GTGCTCGAAGGGGCTGCCGTGCCGGTCCCGCATCAGGTAGTTGATCAGGCCCTGGTC-CT 39839 ||||||||| || |||||| ||||| ||||||||||||||||| ||||| | || | Sbjct 2767 GTGCTCGAACGGCGAGCCGTGACGGTCGCGCATCAGGTAGTTGATGAGGCCACGATCACG 2708 Query 39840 TGGCGAGGTCGACGACCTCCTCG--TG---------CGAGCCTCCGAT-------GGTGG 39881 ||||||| | ||||| || || | ||| || | | || | Sbjct 2707 GGGCGAGG----CCTCCTCCCCGGATGCCGCAGACTCCAGCGTCTGCTCGCCCTGCGTCG 2652 Query 39882 ACACTCGCGCCGCCGTGGCGACGTCGGAGTCAGTGGCGCTCGCCTTGACGAGCTGGACGG 39941 |||| ||||| || | ||| |||| ||| | |||||||| ||||||| ||||| Sbjct 2651 ACACCCGCGCGGCGAAGAGGACATCGGCGTCCGACGCGCTCGCACGCACGAGCTCGACGG 2592 Query 39942 TTACGTCGTTGCGTATCTCGATC 39964 | |||||| |||| | || |||| Sbjct 2591 TCACGTCGCTGCGGAACTGGATC 2569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163290087907254