Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq1741 233 2e-56 seq4322 89.7 5e-13 >seq1741 Length=9891 Score = 233 bits (258), Expect = 2e-56 Identities = 284/387 (73%), Gaps = 0/387 (0%) Strand=Plus/Plus Query 10421 ACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGAT 10480 ||||||||||| ||||||| | ||||||| || |||||||||||| || ||| | Sbjct 4 ACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTTAAC 63 Query 10481 AGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATA 10540 ||||||| ||||| || ||||| ||||| || || |||||||||||||| || || Sbjct 64 CCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAAATT 123 Query 10541 TTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTT 10600 ||||| | |||||| || ||||| ||| | || || |||||| | ||||| || || Sbjct 124 TTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCAGTA 183 Query 10601 ATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTAC 10660 | |||||||||| | ||||||| | | ||| | ||| | || | |||||||| Sbjct 184 ACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCTTTAAACTTACGTGCTTAT 243 Query 10661 GATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACG 10720 ||||| || || ||||| || | || | ||||||||||| || || || |||||||| Sbjct 244 GATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTATACA 303 Query 10721 AAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAACCACAC 10780 || ||||| ||| | ||||||||| ||||||| |||||||| | || || || || Sbjct 304 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCAT 363 Query 10781 GAAAGCTTTGTTTTCCCAGAAGAAGTT 10807 |||| |||| ||||| || || ||| Sbjct 364 GAAAAACTTGTATTCCCTGAGGAGGTT 390 >seq4322 Length=3425 Score = 89.7 bits (98), Expect = 5e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 15399 TATCGGGAATTAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGCCACAGGTTC 15458 |||||||| ||||||||||||||||||| |||| ||||||| ||||| | | ||||||| Sbjct 2418 TATCGGGATGTAGCGCAGTTTGGTAGCGCTCCTGTTTTGGGAACAGGAGGTCGCAGGTTC 2359 Query 15459 AAATCCTGTATTCCCGA 15475 |||||||| |||||| Sbjct 2358 GAATCCTGTCATCCCGA 2342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516428358456000