Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_019527.1 Length=43551 Score E Sequences producing significant alignments: (Bits) Value seq75 172 2e-38 >seq75 Length=46716 Score = 172 bits (190), Expect = 2e-38 Identities = 323/470 (69%), Gaps = 11/470 (2%) Strand=Plus/Plus Query 27117 GCTACGATTTCAACCTTGCCATGGACGCT--CAGCCCGGCCTGGTAACCGTCAGCAACTC 27174 || |||||| | || |||||||| || | ||||| ||||| || ||||||||||| Sbjct 19173 GCCACGATTACGCTCTGGCCATGGATGCCGCCGGCCCG--CTGGTGACGGTCAGCAACTC 19230 Query 27175 CGGCATCCCGGCGTTCCTGACCACCTACATCGACCCGAAAATGATCGAGGTACTGGTTGC 27234 ||||| ||| | | || | ||| |||| || || || | || ||| | Sbjct 19231 GGGCATTCCGAGCTACATGCTGAACTATGTCGATCCCGAACTGGTGCGCGTTCTGACGAC 19290 Query 27235 CCCGATCAAGGCAGCCGAGGCAGTCGGTTCCGAGGTGAAGAAAGGCGACTGGATCACCGA 27294 || || ||| |||| | | || ||| | |||||| |||||||||| ||| Sbjct 19291 GCCCATGCAGGGCGCCGTGATCCTGGG---CGAAGCGAAGAAGGGCGACTGGACCACGCT 19347 Query 27295 AACCGCCATGTTCCCGGTTGTGGAATCCACCGGCCAGACCGCTGCATATGGTGACTACAA 27354 ||||| | |||||||| ||||||||||| || | | | || || |||| ||| Sbjct 19348 GACCGCAACCTTCCCGGTGGTGGAATCCACGGGTGAAGTGTCGTCCTACGGCGACTTCAA 19407 Query 27355 CAACTCCGGCTCCACCGGCGTGAACACCAACTTCCCGCAGCGCCAGAGCTTCCATTACCA 27414 |||| |||| | |||||| ||||||||||||||||||||||||| | ||| ||||| Sbjct 19408 CAACAACGGCCGCGCCGGCGCGAACACCAACTTCCCGCAGCGCCAGTCGTACCACTACCA 19467 Query 27415 GACCGTCTCCCAGTGGGGCGAGAAGGGGCTGGAGCGTGCAGGCGCCGCCCGTATCGACTG 27474 ||| | | | ||||| ||| | |||||| ||||| || ||| |||| Sbjct 19468 AACCATGACGGAATGGGGTGAGCGCGAGCTGGACATGGCAGGTCAGGCGAAGATCAACTG 19527 Query 27475 GGCAAGCCGTGTCGGGA--TCGCCTCCGTGCTGACCCTGAACAAGTTCCAGAACAAGACC 27532 ||| | || | | | |||| |||| | || ||||||||||||||| |||| | | Sbjct 19528 GGC--GTCGGAACTGAACATCGCATCCGCGTTGGTGCTGAACAAGTTCCAGGACAACAGC 19585 Query 27533 TACCTCTTCGGTGTGGCTGGTTTGCAGAACTACGGCATGCTGAACGACCC 27582 ||| ||||||| | || || |||||||||| ||| ||||||||||||| Sbjct 19586 TACTTCTTCGGCATCGCCGGCCTGCAGAACTATGGCCTGCTGAACGACCC 19635 Score = 156 bits (172), Expect = 1e-33 Identities = 466/712 (65%), Gaps = 18/712 (3%) Strand=Plus/Plus Query 21997 CATAGAGCCGATGTGGACCAGCCCCAGCGCCTACAACGCTCTCGACCCGACCGCGCCGGA 22056 ||| || ||| ||||||| | ||| | |||||| | |||||| | |||| Sbjct 14947 CATCGACCCGGTGTGGACGACGCCCTACCTGTACAACAGCGACAACCCGATGCGGGCGGA 15006 Query 22057 CTTCTATAAGCCCAGCACATGGTGGGTGTTGGGGCGGGAGATGCAC-GCTTCGCGCCTGC 22115 ||||| ||||||| | | |||| ||| ||||||| || ||||| || | ||||||| Sbjct 15007 TTTCTACAAGCCCACCTCGTGGTTCGTGCTGGGGCGCCAGGTGCACAGCAGC-CGCCTGC 15065 Query 22116 TGACCATCATAACCCGCCCGCTGCCGGACATGCTCAAGCCTGCCTATAACTTCTCTGGGA 22175 ||| |||| | | ||| | |||||||| |||| ||| || | || |||||| || | Sbjct 15066 TGAGCATCGTGTCGCGCGAGGTGCCGGACCTGCTGAAGGCTTCGTACAACTTCGGCGGCA 15125 Query 22176 TCTCAATGTCCCAGCTGGCACAGCCCTACGTTGAGAACTGGTTGCGCACCCGGCAATCCG 22235 | || ||| | |||||||| || ||||| | |||||| || || || || ||| Sbjct 15126 TGTCGATGACGCAGCTGGCGATCCCGTACGTCAACAACTGGCTGAAGACGCGCCAGGCCG 15185 Query 22236 TCAGTGACCTGGTGGACAAATTCTCCCGCACCTTCCTCAAGACCAACATGGCCCAGGTGC 22295 | ||||| | || |||||| | | | ||| || |||||||| | | | Sbjct 15186 TGGCGAACCTGATCGATGGCTTCTCCGTCCCGCTGTTCAGCACGAACATGGCTTCGATCC 15245 Query 22296 TGAATGGTGGCGA---GGGTGGCGACGTCTTCGATCGCGTCGAAATGTACGTCAACATGC 22352 || || ||||| ||| ||| || |||| |||||||| ||| | | ||||| Sbjct 15246 TG---GGCGGCGATCCGGGCACCGATGTTTTCGGCCGCGTCGACCTGTTCAACCGCATGC 15302 Query 22353 AGAGCAATCTCGGCTTGGCGGTGATGGACTTCGATTCCGAGGACATCGTGCAGGTAAACA 22412 || ||| | |||| | || ||| ||| || ||||||| || | | || Sbjct 15303 GGACCAACCGCGGCGCGTGGGCGATCGACAAGGAGAGCGAGGACTTCCGGTTCGAGAATG 15362 Query 22413 CCCCGTTGTCAGGACTGGCTGACCTGCAAAGCCAGTCACAAGAGCACATGTGCTCGGTAT 22472 ||| |||| || |||| || || || | |||||| | ||||| ||| || | Sbjct 15363 TGCCGCTGTCCGGCCTGGATGCGCTACAGAACCAGTCCCTGGAGCAATTGTCTGTCGTGT 15422 Query 22473 CAAAGATCCCGGCAATCAAGCTCACTGGCATTAGTCCGTCCGGCCTGAACGCGAGTAGCG 22532 | |||||| ||||||| | |||||| || |||||||||||| | |||| Sbjct 15423 CCGGCATCCCGCTGGTCAAGCTGATGGGCATTTCGCCCAGCGGCCTGAACGCCAC-AGCG 15481 Query 22533 -AGGGGGAGATCCGCTCCTTCTATGACGATATCAGCTCGGTGCAGCA----GTCTTACTA 22587 | || || |||||| |||||| ||||| || ||||| |||| | || || | Sbjct 15482 GACGGTGAAATCCGCGTCTTCTACGACGACATGCACTCGGCGCAGGAAGCGGTGTTCCG- 15540 Query 22588 TTTCAGCCCGCTGGACACCATGCTGAAAGTCATCCAGCTCAGCAAGTGGGGCGAGATTGA 22647 | |||||| | || ||| | || ||||||||| | ||| |||||||| || Sbjct 15541 ---CGACCCGCTACAGACGTGCCTGGAGGTGATCCAGCTCGACGAGTTCGGCGAGATCGA 15597 Query 22648 CGACGCGATCACCTTCAAGTTCAAGTCGCTGTGGCAGACCAGCGCGAAGGAG 22699 | | || ||||||| ||| | |||||||||||| |||| ||||||| Sbjct 15598 CCCGGACATTACCTTCAGCTTCGTGCCGCTGTGGCAGATGAGCGAGAAGGAG 15649 Score = 120 bits (132), Expect = 8e-23 Identities = 351/532 (66%), Gaps = 13/532 (2%) Strand=Plus/Plus Query 25278 TGGCCTTTGACCG-GCAATCCGCTCGCAGCATTGACGCTGACGGGCGCCTGCACATTTCC 25336 ||||||| ||||| || | ||| |||| || |||| |||||||| ||||| || Sbjct 17257 TGGCCTTCGACCGCGCCA-CCGTCCGCAAGATCGACGTCGACGGGCGGATGCACGTTGAG 17315 Query 25337 AAGACCAACATCAGCAAGGCGAACGTCTGCCCGTACTTCGGGCAAGAAATCCCAAACTGG 25396 | ||||||||||||||||| ||| ||| ||| || | || ||||| ||||| Sbjct 17316 GTCAGCAACATCAGCAAGGCGACGGTCAACCCCTACCGGGGCGACGAGATCCCTGACTGG 17375 Query 25397 CAGGAGCTGGGGCTGGAAGGCGACAAGGTTTATCGGCTGTACCGCGACCCAGAAGAGCTG 25456 ||| ||||||||| || | || | || |||| || || || ||||||||| Sbjct 17376 GAGGCGCTGGGGCTTGACCCCAACCGCATCTACTTCCTGTTGCGTGATCCGGAAGAGCTG 17435 Query 25457 GC-CAAG-GGCGCCAGCACGTTCAACAACCTGCCTATCCTCAACAAGCACATTCGCGTGA 25514 || | | |||||| ||| ||||||||| | || | || ||||||||| | ||| Sbjct 17436 GCGCGCGCGGCGCC--CACCTTCAACAACATCCCGCTGCTGTCCAAGCACATCCCCGTCT 17493 Query 25515 CGGTTGAGAAGCCTGAAAAGGAAAGCATTGTCGGATCCATTGGATCGGATGTTTC--TCT 25572 ||| | |||| | || || | | ||||| ||| || ||| | | || | Sbjct 17494 CGGCCGCTGAGCCGCAGAAAGAGTTCGTGGTCGGGGCCACGGGTTCGAACGCCTCCTACC 17553 Query 25573 TGGCGACCCGTATCTGCAGGCCTCCCTCTGCGTTTGGGATGAGGCTGCAATCGCTGGCAT 25632 |||| ||||| || || |||||| || ||||| | | || || || ||| Sbjct 17554 AGGCG--CCGTACCTCAAGAATTCCCTCGTTGTGTGGGACGCCGTCGCGATTGCGCTCAT 17611 Query 25633 CGAGGCCAAGAAGCAAATCGAGCTGTCCGCAGCCTACTACTACACCGCAGACATGACCCC 25692 ||| | | |||||| ||||| || ||||| |||| || || ||||| || Sbjct 17612 TGAGTCTGATGAGCAAAAGGAGCTTTCGAGCGCCTATCGCTACCGTGCCGATATGACGCC 17671 Query 25693 CGGCACCGCGCCAGATGGCGAGGCATTCGACGGCGTGATGCGAGACATAAAAGGTAATCA 25752 ||||| | || |||| ||| |||||| |||||||||||||| || ||||| Sbjct 17672 CGGCA---AGTTTGAAGGCGTCGCACACGACGGGGTGATGCGAGACATTCGCGGCAATCA 17728 Query 25753 CCTGGCGCTTGTGGAGGCTGGCCGCGCCGGGCCAGATGTGTACGTGGCCGAC 25804 | | |||||||| || | ||||| || || || || || ||| | |||| Sbjct 17729 CGTCGCGCTTGTCGAAGTGGGCCGTGCAGGCCCGGACGTCGTCGTAGGCGAC 17780 Score = 91.5 bits (100), Expect = 4e-14 Identities = 117/158 (74%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 27881 ACCGGTTCCGGCGAGCAGATCCAGCTGGTTGTTGACGAGATCGAAGGCCAGCGCACTTGG 27940 || || || || ||| | | ||||| | | ||| ||||||||||||| || ||| Sbjct 19913 ACGGGCTCGGGTCAGCTGGTGCAGCTCATCGCGGACTCGATCGAAGGCCAGA--ACGTGG 19970 Query 27941 GA-CTGCTGC-TTCACCGAGAAGATGCGCGCCCACCCGGTGGTTGTCGAGATGTCCGCCT 27998 || | || || |||||||||||||||||||| ||| | | || ||| | ||| || Sbjct 19971 GAACCGCCGCCTTCACCGAGAAGATGCGCGCGCACGCCATCGTCCGCGACACCTCCAGCT 20030 Query 27999 TCAAGCAGAAGAAGAGCCAGGGCACCTGGGGCACCGTC 28036 |||||||||||||| |||||||| |||||| ||||| Sbjct 20031 TCAAGCAGAAGAAGTCGCAGGGCACGTGGGGCGCCGTC 20068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139228373701494