Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq180 116 4e-21 >seq180 Length=35712 Score = 116 bits (128), Expect = 4e-21 Identities = 319/481 (66%), Gaps = 21/481 (4%) Strand=Plus/Minus Query 44164 TCAACACCCTGCCGGAGTTCTACTGGCTGACCAACTATCTGGAGACTGTGTTCAGCTCTG 44223 |||||||| |||||| ||| ||||||| || ||| | || || ||||||||| | Sbjct 29970 TCAACACCAAGCCGGAATTCGCCTGGCTGGTCACCTACATCGAAACGCTGTTCAGCTGCG 29911 Query 44224 AGATC-TGGAAGCCGATGACGAACGCCACCATCGCCCTGCATTA---CAAGGCACTGATG 44279 | ||| ||||||||| || |||||||||||| | | || |||| || || Sbjct 29910 A-ATCGTGGAAGCCGTCCACCGTGGCCACCATCGCCTTCGAATATCGCAAG---CTCTTG 29855 Query 44280 GTGAAAGCTGCCCTCGCC--ACAGGCGTGTCGCCGGACCATTGGTTCATCGACTACCAAG 44337 | || | | |||| || ||| || |||| ||| || ||| |||| Sbjct 29854 ACCTA--CTTCGCCCGCCTGACCGGCAGCCCGATGGAC------TTCGTCAACTGGCAAG 29803 Query 44338 GCCACGACTTCTCCTTCCGTGGCATGAGTGGATGGCACGATGCTGCGTCTTCCGGTTCCG 44397 ||||||||||||| | || |||||| || | |||| || ||| ||| Sbjct 29802 GCCACGACTTCTCGATGCGCGGCATGTCCGGCCTGTACGACGCCCGCAAGAGCGGCGCCG 29743 Query 44398 GTCATCTGGTGTTCTTCAAAGGCACTGATACCAACCCTGCCCTGGACTTCGTAGAAGAGT 44457 | || ||| ||| |||| ||||| || |||| ||| ||| | |||| | | ||||| Sbjct 29742 GCCACCTGCTGTCGTTCACCGGCACCGACACCATCCCGGCCATCGACTACCTGGAAGACA 29683 Query 44458 ATTATGGCGCAGACATCGACGAAGACTATGTCGTTGCTGGTTCTGTTGCGGCTACCGAAC 44517 || ||||| ||| |||| || |||| || || || || | || ||||||| Sbjct 29682 TCTACGGCGCCGACTCCGACCGCGAACTGGTCG--GC-GGCTCGGTGCCCGCGACCGAAC 29626 Query 44518 ACGCCGTGATGTGTATGGGTACGAAGGATGGCGAATTCGAAACCTTCCGCCGCCTGGTGC 44577 || | || ||||| |||| | ||||| |||||| |||||||| ||||||||||||| Sbjct 29625 ACTCGGTCATGTGCCTGGGCAGCAAGGAAGGCGAAATCGAAACCATCCGCCGCCTGGTCA 29566 Query 44578 AGGACGTGTATCCTGATGGCATCGTCAGCATCGTGTCTGATGCGTGGGATTACTGGCAGG 44637 | | || ||||| | || ||||| | ||||| || | ||||| | |||||| | Sbjct 29565 CGCAGGTCTATCCGGCCGGTATCGTGTCGGTGGTGTCCGACACCTGGGACTTCTGGCAAG 29506 Query 44638 T 44638 | Sbjct 29505 T 29505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510617739503360