Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq4354 264 5e-66 seq1581 203 1e-47 seq6107 190 8e-44 >seq4354 Length=3390 Score = 264 bits (292), Expect = 5e-66 Identities = 916/1381 (66%), Gaps = 71/1381 (5%) Strand=Plus/Plus Query 54863 CACGAGTTCCGCAAACTCGACTTCGCGACGCAGCAGGGCAACATC-AAGGGCATCGACCC 54921 || ||||||||||||||| ||| ||||| || | | | || | |||||| |||| || Sbjct 1273 CAGGAGTTCCGCAAACTCTCCTTTGCGAC-CAATATGTCGACGTTGAAGGGCGTCGATCC 1331 Query 54922 GGCCGGCTCGCAACGCGCGATGGACCTGTTCATGAAGGCGCAGTACCTGCGCTCGAAGAA 54981 | ||||||||| |||||| ||| |||||| | ||| ||| ||| | | |||||| Sbjct 1332 GAACGGCTCGCAGCGCGCGTGGGATCTGTTCGTCAAGTCGCGCTACGTCGACATGAAGAA 1391 Query 54982 GCCGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCCGATCACGAACACGATGGGCGAGCT 55041 |||||||| |||||||| ||| || ||||| |||||||| ||||| | |||||| | Sbjct 1392 CCCGGGCCGTGCGCTCGTGCTCGCCTCCGGCACCCCGATCACCAACACCCTCGGCGAGAT 1451 Query 55042 GTTCACGGTGCAACGCT-TCTTCCAGCCCGAGCAGATGGCCGAGGACGGTCTGGACACCT 55100 |||| |||| ||||||| ||| | ||| || |||| || ||| || | Sbjct 1452 GTTCTCGGTCCAACGCTATCTCGGATATGTGGCAT-TGCTCGAGCGTGGCCTGCACGAAT 1510 Query 55101 TCGACGCGTGGGCGA--ACCAGTACGGCGACGTCGTGGCGGGCTTCGAGCAGAACGCGGC 55158 ||||||| |||||| ||| | ||| |||||| | | | |||| | | | | | Sbjct 1511 TCGACGCCTGGGCGTCGACC--TTCGGTGACGTCTCGACCGAGCTCGAACTGCAGCCATC 1568 Query 55159 GGGCGGCTATGAAGTCGTCAGCCGCTTCGCGAAGTTCCAGAACGTGCCGGAGCTGATGCG 55218 ||| || | |||| ||||||||||| ||| ||||| || |||||||| || Sbjct 1569 GGGTAAATACAAGCCCGTCTCCCGCTTCGCGACCTTCGTCAACGTTCCCGAGCTGAT-CG 1627 Query 55219 CCGCGTGC-GCTCGTTCATGGACATCCTGACGAGCTCGCAGCTCT-CGC-AGTACGTCGA 55275 | || | |||| || ||| || ||| | | || | | | ||| ||||||| | Sbjct 1628 CGATGTTCCGCTCCATCGCCGACGTCGTGATG--CCCGAGGATTTGCGCCAGTACGTGAA 1685 Query 55276 CCGCCCGGCGATCGATGGCGGCGGCCGTCAGGTCATGGTCACGCCGGAGCCGTTCG--GC 55333 ||||||||| |||| | || ||| || | ||| | |||||| || || Sbjct 1686 GGTGCCGGCGATCTCGACCGGCAGACGGCAGATCCT---CACAGCAAAGCCGTCCGCTGC 1742 Query 55334 TATAAGGCAT-ACCAGAAGGCGCTCGAACAGCGCATCACCGCGATCCGTAACCGCAAGGG 55392 | | || | |||||| | ||||| ||||||||| |||||| | ||| | | Sbjct 1743 ATTCAAGCGTTACCAGACGCTGCTCGGCGAGCGCATCAAGGCGATCGAGGAGCGCGACCG 1802 Query 55393 GCCGCCCTCGAAGGGGCAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCCGC 55452 ||||| | || | |||||| || || || ||| | || ||||| | | || Sbjct 1803 TGCGCCCGAGCCCGGCGACGACATCCTCTTGTCGGTCATCACCGATGGCCGCCACGCGGC 1862 Query 55453 GATCGACATGCGCTTCGTCGA-CCCGACCGCGCCGAGCGACCCGAACAGCAAGCTGAACC 55511 ||||||| ||||| | ||||| |||||| | | | ||| | ||| ||||||||||| Sbjct 1863 GATCGACCTGCGCCTGGTCGATCCCGACAATGACAA-CGAGGCCGACAACAAGCTGAACC 1921 Query 55512 AGATGCTCG---ACGCCGTG---ATCGCCGACTATCACGCGGCGTCCGACTTCGAGTATT 55565 || | ||| ||||| | ||| | | || || | | | || | || Sbjct 1922 AGCTCGTCGGCAACGCCTTCCGCATCTGGGGCGATACTGCCGAGCGCACCTATG----TT 1977 Query 55566 CG-ACGAACGGCAAGG---TCGACCCGATCAAGGGCGCGTCGCACATCATCTTTACCGAC 55621 || || |||||||| |||| | | | |||||| |||| || ||||| | ||| Sbjct 1978 CGCACCGACGGCAAGCCGTTCGAACTGCCC---GGCGCGGCGCAGATGATCTTCTCGGAC 2034 Query 55622 ATCGGGCTCGGCGAGCAGTCGGCGAAGAACCGCGGCTTT--GACATGAAGGCGTGGAT-C 55678 |||| | | ||| |||| |||| |||||||| | | | | || ||||| | Sbjct 2035 CTCGGCACCATC-AGC-GTCGA-GAAGTCGCGCGGCTTCTCGGCCT-ATCGC-TGGATTC 2089 Query 55679 GAAAAGCGTCTGGTCGAGGGCGGCGTGCCGCGCGAGC-AGATCGCGTTCATGCGCGA--- 55734 | | | | || ||| ||||||||| || | | ||||| ||||||| || Sbjct 2090 GCGACGAG-CTCGTCCGCATGGGCGTGCCG-GCATCCGAAATCGCCTTCATGCAGGATTT 2147 Query 55735 CAACAAGGAGCACGCCAAGAAGGAGCGCCTGTTCGCGGACATGCGCGAGGGCAAAAAGCG 55794 ||| ||| | | || |||| |||||||||||| ||| |||||| ||||| || Sbjct 2148 CAAGAAGTCGGAGGC---GAAGCAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTCCG 2204 Query 55795 CATCCTGATCGGCGGCAAGGACA---TGGAAACCGGCGTGAACGTGCAGAAGCGCCTCTA 55851 | |||||||||| || ||||| ||| |||||||| |||| |||| ||||||| | Sbjct 2205 CTTCCTGATCGGGAGCTCGGACACGATGGGGACCGGCGTCAACGCGCAGCTGCGCCTCAA 2264 Query 55852 CAGCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGCGTCCGTCGAGCAGCGCGAGGGGCG 55911 | | | || || |||| ||||||| | ||| || |||||||||||||||| || Sbjct 2265 GGCCTTGCATCACCTCGACGTGCCGTGGCTGCCGTCGCAGATCGAGCAGCGCGAGGGCCG 2324 Query 55912 CATCATCCGCCAGGGCAACCAGAACAAGCAGGTGCGCATCCGCGCGTGGGCGACGAAGGG 55971 |||| | ||||||||||||||| || | |||| ||| ||| | ||||| |||| Sbjct 2325 CATCGTGCGCCAGGGCAACCAGCACGACGAGGTCGATATCTTCGCCTATGCGACCGAGGG 2384 Query 55972 C-AGCTACGA-CAGCACGATGTGGGGGATGAACGCCCGCAAGGCGCGGTTCATCGAACAG 56029 | ||| ||| ||| ||||||| || |||| |||||||| || ||||||| | Sbjct 2385 CTCGCT-CGATGCGCA-GATGTGGCAGAACAACGAGCGCAAGGCCCGCTTCATCGCCGCG 2442 Query 56030 GCCCTCAACGGCGACGACAGCG-TGCGCTCGCTCGAGGACGTGTCTGA-AGCGTCGGC-- 56085 || || ||||||| || || | ||| |||||||||| || || ||| | | Sbjct 2443 GCTCTTTCCGGCGAC-ACTTCGATCCGCAGGCTCGAGGACATGGGCGAGAGCCAGGCCAA 2501 Query 56086 ---GTTCGACATGGCCGCCGCGCTGGCGTCGGGCGACGAGCGCTATCTGAAGATGGCCGG 56142 ||||| |||||| ||| | |||||||| ||| ||| || ||| |||||| Sbjct 2502 CCAGTTCGCGATGGCCAAGGCGATCGCGTCGGGTGACCCGCGGCTGATGCAGAAGGCCGG 2561 Query 56143 CCTGAAGGCCGACGTCGAGCGCCTGGAGCGTCTGAGCTACGCGCACCACGACGACCAGAA 56202 || |||||||| ||| ||| || || || ||| || ||| || ||| || ||| | Sbjct 2562 GCTCGAGGCCGACATCGCGCGGCTCGAACGCCTGCGCGCCGCCCATATCGATGATCAGCA 2621 Query 56203 C 56203 | Sbjct 2622 C 2622 Score = 192 bits (212), Expect = 2e-44 Identities = 663/1012 (66%), Gaps = 59/1012 (6%) Strand=Plus/Plus Query 53669 GACGTCATCGACGCGCTCGGCACATCGATCTACGAGGACCCGGCAAAGGGCT---GGCAG 53725 || ||| ||| || |||||||| |||||| | || ||||| | || | ||||| Sbjct 58 GATGTCGTCGCCGAGCTCGGCAGCGCGATCTTCCGCGATCCGGCTGACGGTTCATGGCAG 117 Query 53726 ACGTCCGACGCGTACCTGTCGGGCAACGTCGTGCG-CAAACTCGCCGAGGCGCAGGCCGC 53784 ||| | ||||| || ||||| ||| ||| | ||| ||| ||| ||| | || || Sbjct 118 ACGGCGGACGCCTATCTGTCAGGCCCCGT-GCGCGACAAGCTCAAAACGGCAGAAGCGGC 176 Query 53785 CGCGCGCAG-CGACCGCA-AGTATCAGCGCAACGTCGAGGCGCTGCTGGCCGTGCAGCCG 53842 || |||| |||| ||| |||| ||||||| ||| ||||||| | ||| ||||| Sbjct 177 GGC-CGCACTCGAC-GCAGAGTACGAGCGCAATGTCACTGCGCTGCAAGGCGTCCAGCCC 234 Query 53843 AAGCCG--CTCGGCCCGACCGACATCACGGTGAAGCTGGGCCAGAACTGGATTCCGGCCA 53900 |||| ||| ||||| |||||||||||| | ||| ||| | ||||| |||||| Sbjct 235 --GCCGATCTCAGCCCGTCCGACATCACGGCGCGGCTCGGCGCGCCATGGATCCCGGCCG 292 Query 53901 GCGACGTCGCCGCGTTCGCGAGCGAGGCACTGAACGAGAAGATCGACGTCTCCTACAACT 53960 ||| ||| ||| |||| | ||| | || || | ||| | || | ||| Sbjct 293 CCGATATCGTCGCTTTCGTCAAGGAGACGATGGGCGCCGACATCAAAATCCACCACATGC 352 Query 53961 CGCGGCTCGGCTCGTGGTCCGCCGAG-CAATCCGGCTCGAACTATTCGGAGTTCAACACC 54019 | ||||| |||||| | | ||| || || ||||| || || | | ||| Sbjct 353 CCGAGCTCGCTTCGTGGACGGTGGAGGCACGCCAGCTCGG-CTGGATGGCGGCCGGCACG 411 Query 54020 -CCGAA---------GAT-----GAACGCCGGCCAGATCCTCGACGCGGTGCTGAACAAC 54064 ||||| ||| | | || ||| || |||||| || | |||||||| | Sbjct 412 TCCGAATGGGGCACCGATCGGCGGCATGCGGGCGAGCTCCTCGCCGACGCGCTGAACAGC 471 Query 54065 CGC------CAGATCAAGGTCACGTTCCGCGACCAGGACGGCAAAA--------CGCA-C 54109 ||| |||||| | ||| || || |||| ||| | | ||| | Sbjct 472 CGCGTGCCGCAGATCTTCGACAC----CGTGA--AGGATGGCGACAGCGAGCGCCGCGTC 525 Query 54110 GTCGACGCCGAGGCGACCGAGAAGGCCAACGACGTCGC-GCAGAAGATGCGCGCCGCGTT 54168 || | | || | |||||| ||| || |||| || ||||||||| | || || Sbjct 526 CTCAATGTCGTCGACACCGAGGCGGCGAA-GACGAAGCTGCAGAAGATCAAGGACGAATT 584 Query 54169 CAGCCGCTGGATTTGGACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGA 54228 | |||||||| ||| | ||| | | ||| ||||||| || | | ||||||||| Sbjct 585 CCAGCGCTGGATCTGGTCCGACCCCGATCGCACCGACCGCCTGGCGCGCGTCTACAACGA 644 Query 54229 GAACTTCAACAACATCGCCCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGT 54288 |||||||||||||||||| ||| ||||| || ||||| |||| ||| || |||| Sbjct 645 CCGCTTCAACAACATCGCCCCACGCGCCTTCGATGGATCGCATCTGAAGCTACCCGGCGC 704 Query 54289 GTCGCTGCGC-TTCGACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGG 54347 || |||| || | || | | | ||||| || | |||||||||| ||| || Sbjct 705 CTCTG-GCGCCTTTGTTCTTTATGGGCATCAGAAACGTGGCATCTGGCGCATCATCTCGG 763 Query 54348 AAGGCGATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGA 54407 || | || |||||||||||||||||||| |||||||| | |||||| || Sbjct 764 CGGGTTCGACCTATCTCGCGCACGCTGTCGGCGCCGGCAAGACCATGACGATGGCGGCCG 823 Query 54408 CCGGCATGGAGGAGCGCCGGCTGGGCCTGTCCAACAAGCCGATGTATGCGGTGCCGAACC 54467 | | |||||| |||||||||| |||||| | |||| ||||| | || || || Sbjct 824 CGGTGATGGAGCAGCGCCGGCTCGGCCTGATCGCCAAGGCGATGATCGTCGTTCCCGGCC 883 Query 54468 ACATGCTCGCGCAGTTCGCGCGCGAGTTCCTTGAGCTGTACCCGGCCGCGAACATCATGG 54527 || || |||||| |||||||| || || | ||| || ||| |||| ||| ||| Sbjct 884 ACTGCCTGGCGCAGGCGGCGCGCGAATTTCTCGCGCTCTATCCGAACGCGCGGATCCTGG 943 Query 54528 TCGCGGACGAGCAGAATTTCCATACGCACAACCGCCGCCGGTTC--GTCGCGCAGGCCGC 54585 ||||||||||| |||||| | | |||| || | || ||| ||||||| || || Sbjct 944 TCGCGGACGAGACCAATTTCAGCAAGGACAAGCGGCATCGCTTCCTGTCGCGC--GCGGC 1001 Query 54586 GCTCAATAACCCGGACGCGATCATCATCACGCACTCGGCGTTCGGCCGCATC 54637 | | | ||| |||||||||||||| || || || ||| || |||| Sbjct 1002 GACCGCGACTTGGGATGCGATCATCATCACCCATTCAGCTTTCCGCTTCATC 1053 >seq1581 Length=10720 Score = 203 bits (224), Expect = 1e-47 Identities = 245/332 (74%), Gaps = 5/332 (2%) Strand=Plus/Plus Query 9694 GCATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCC 9753 |||||||||| || ||||||||||| ||||| ||||| || ||| |||||||||| || Sbjct 10285 GCATGGCATCGGTTAACAAAGTCATTCTCGTGGGCAACCTGGGTCGCGACCCGGAAGTCC 10344 Query 9754 GCTATCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACA 9813 |||| ||| ||| | |||||||| |||||| | |||| |||||| | | Sbjct 10345 GCTACAGCCCCGACGGGGCCGCAATCTGCAACATGTCCATCGCCACGACCTCCACCTGGA 10404 Query 9814 AGGACAAAGCCAGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCTTCG 9873 ||||||| || ||||| | |||| ||||| ||||||||||| | | | | | Sbjct 10405 AGGACAAGGCATCGGGCGAACGCCGCGAAGAAACCGAATGGCACCGCGTGGTCATGTACA 10464 Query 9874 GCCGCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGGTCTACATCGAGG 9933 |||||| ||||| |||| || ||| ||||| |||||| |||||||||||||||| Sbjct 10465 ACCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGCCGCTCGGTCTACATCGAGG 10524 Query 9934 GGCGCATCAAAACGCGGAAGTGGCAGGATCAA----TCCGGCCAGGATCGCTACACGACC 9989 | ||| | || || || |||||||| || ||| ||||| || ||||||| ||| Sbjct 10525 GCCGCCTGAAGACCCGCAAGTGGCAAGA-CAAGGACACCGGCGCTGACCGCTACAGCACC 10583 Query 9990 GAGATCGTCGCCGACAAGATGCAGATGCTCGG 10021 || |||||||||||| ||||||||||||| || Sbjct 10584 GAAATCGTCGCCGACCAGATGCAGATGCTGGG 10615 >seq6107 Length=1809 Score = 190 bits (210), Expect = 8e-44 Identities = 334/476 (70%), Gaps = 18/476 (4%) Strand=Plus/Plus Query 54162 CCGCGTTC-AGCCGCTGGATTTGGACGGACACGAAGCGCGCCGACCGGCTCGT-CAACTA 54219 |||||||| || | |||||| ||| | || | | ||| |||| || || | | || Sbjct 950 CCGCGTTCCAGAC-CTGGATCTGGTCCGATCCCGATCGCACCGATCGCCTGGCGCGGCT- 1007 Query 54220 CTACAACGAGAACTTCAACAACATCGCCCCGCGCCAGTTCGACGGCTCGCACCTGACGCT 54279 |||||| || | ||||||||||||| || ||||| ||||| || ||||||| | ||| Sbjct 1008 CTACAATGACACGTTCAACAACATCGTGCCCCGCCATTTCGATGGAACGCACCTCAAGCT 1067 Query 54280 GCCGGGCGTGTCGCTGCGCTTCGAC-CTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCG 54338 || |||| || |||| | | || | |||||||||| |||||||||||| Sbjct 1068 TCCCGGCGCCTCTG-GCGCCTTTTCTCTTTATGGACACCAGAAGCGGGCCATCTGGCGCA 1126 Query 54339 GCAT----TCAGGAAGGCGATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTC 54394 ||| || || || ||||| ||||||||| |||||||| ||||||||| || Sbjct 1127 TCATCGCTTCCGGCAGCACCTATGT----CGCGCACGCCGTCGGCGCCGGCAAGACGCTC 1182 Query 54395 ACGATGATCGCGACCGGCATGGAGGAGCGCCGGCTGGGCCTGTCCAACAAGCCGATGTAT 54454 |||| |||| | ||||||| | |||||||| |||||| ||||||| ||||| Sbjct 1183 TCGATCGCCGCGGCGATCATGGAGCAACGCCGGCTCGGCCTGATCAACAAGGCGATGCTC 1242 Query 54455 GCGGTGCCGAACCACATGCTCGCGCAGTTCGCGCGCGAGTTCCTTGAGCTGTACCCGGCC 54514 | ||||| ||| ||||||||| ||||||||||||||| | ||| || || Sbjct 1243 GTCGTGCCAGGCCATTGCCTCGCGCAGGCCGCGCGCGAGTTCCTGGCGCTCTATCCCAAT 1302 Query 54515 GCGAACATCATGGTCGCGGACGAGCAGAATTTCCATACGCACAACCGCCGCCGGTTC--G 54572 ||| |||| | ||||| |||||| ||||||| | | | || || | ||| ||| | Sbjct 1303 GCGCGCATCCTCGTCGCCGACGAGACGAATTTCGTGAAGGAAAAGCGTCACCGCTTCCTG 1362 Query 54573 TCGCGCAGGCCGCGCTCAATAACCCGGACGCGATCATCATCACGCACTCGGCGTTC 54628 |||||| || ||| | ||| ||| |||||||||||||| || || || ||| Sbjct 1363 TCGCGC--GCGGCGACCGCGAACTGGGATGCGATCATCATCACCCATTCCGCCTTC 1416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201301973597607