Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_019923.1 Length=42689 Score E Sequences producing significant alignments: (Bits) Value seq27 347 3e-91 >seq27 Length=64058 Score = 347 bits (384), Expect = 3e-91 Identities = 518/727 (71%), Gaps = 26/727 (4%) Strand=Plus/Plus Query 5685 GTCACATTGCTGGACGTGGCGAAAACCCTGGACCCGGACGGCAAGACCGCTGCAGTAGCG 5744 ||||| |||||||| | || || || | |||||||||||||||||||| | || | Sbjct 17048 GTCACCCTGCTGGACTTCGCCAAGTCCATCGACCCGGACGGCAAGACCGCAACCGTGGTC 17107 Query 5745 GAACTGCTGAGCCAGGACAACGAAATGCTGCTCGACATGCCGTGGTACGAGGGCAACTTG 5804 |||||||||| |||| ||||||||| ||| ||||||| |||| ||||||||| | Sbjct 17108 GAACTGCTGAACCAGACCAACGAAATCCTGACCGACATGATGTGGCTGGAGGGCAACCAG 17167 Query 5805 CCCACCGGCCACCGCGTGACCACTCGCACCGGCCTGCCTGAGC-CTGTATGGCGCAAGCT 5863 ||||||| |||||| || | |||||||| ||||| || | | || |||||| |||| Sbjct 17168 TCCACCGGGCACCGCAGCACGATCCGCACCGGTCTGCC-GACCTCCGTCTGGCGCCAGCT 17226 Query 5864 GAACGGCGGCGTGCCACCGAGCAAGGCGACCACTGCACAGCTTGACGAGGCCTGCGGCAT 5923 | || |||||||| || ||| |||| ||| ||| | || || |||||||||| Sbjct 17227 GTACCAGGGCGTGCCGGCGTCGAAGTCGACGCGTGCGCAGGTGGATGACACCTGCGGCAT 17286 Query 5924 CTTGGAAGCGCGCTCCGAGATCGACAAAGACCTGGCCATGCTGAACGGCAACACCCCGCA 5983 ||||| | ||| |||| | ||||| ||| | || |||||||||| || | | Sbjct 17287 GCTGGAAACTCGCGCCGAAGTGGACAAGGACATCGCGGAATTGAACGGCAATACGTCCGA 17346 Query 5984 GTTCCGACTGCTGC-AGGCCAAGGCTCACCTCGAGGCCATGAACCAGCGCATG--CAGCA 6040 ||||| || || | ||||| | ||| ||| || |||||||||| |||| |||| Sbjct 17347 CTTCCGCCT-CTCCGAGGCCCAAGCTTTCCTGGAAAGCATGAACCAGACCATGGCCAGCT 17405 Query 6041 ACAAGTCATCTACGGCGACCGCTC---CACCCCTGAGGCCTTCGTCGGCCTTTCGCCGCG 6097 || |||||||||| | || || || ||| | || |||||| |||| || Sbjct 17406 CGCTGT--TCTACGGCGATCAGTCGGTCAATCCCGAGCGCATCACCGGCCTGGCGCCCCG 17463 Query 6098 CTATGACGACGTGCCAACCACTGTCGGCGGCGCAGCCACCAAGGACAACGTGATCGACGC 6157 || | || ||| | |||| | ||| | | ||| | |||||||| Sbjct 17464 CT-TCTCG------------CTGAAGTCGGCCC--CCAACGGCGGCAATATCATCGACGC 17508 Query 6158 TGGCGGTACCGGCACCGACAACTCGTCCATCTGGCTGATCGGCTGGGGCGCCAACACCAT 6217 |||||||||||| |||||||| |||| ||||| || | | |||||| |||||| Sbjct 17509 AGGCGGTACCGGCGCCGACAACACGTCGGTCTGGTTGGTGGTGTGGGGCAAGAACACCGC 17568 Query 6218 CCACGGCATCTACCCGAAAGGCTCGCAGGCAGGCCTGATCCACAACGACCTAGGCGAGAT 6277 |||||||||| ||| || ||||| |||| |||||||||||| | ||| | || ||| Sbjct 17569 GCACGGCATCTTCCCCAAGGGCTCCAAGGCCGGCCTGATCCACGAGGACATGGGTCTGAT 17628 Query 6278 TGACGCGTTCGATGCCAGCATGAACCGCTTCCGCGCCTACGGCGACCAGTACCAATGGAA 6337 ||||||||||| ||| || ||||||||||||||||||| |||||| | |||||||| Sbjct 17629 CGACGCGTTCGACTCCAACAACAACCGCTTCCGCGCCTACGCCGACCACTGGCAATGGAA 17688 Query 6338 GGCCGGTATTGCCGTGCACGACTGGCGCTACGCCGTTCGTATCGCAAACATCGACAACAG 6397 | || | | ||| |||||||||||||| || |||||||| ||| | |||| ||| Sbjct 17689 ATCAGGCCTGACGTTGCGCGACTGGCGCTACGTGGTGCGTATCGCGAACGTGGACATCAG 17748 Query 6398 CGACCTG 6404 ||||||| Sbjct 17749 CGACCTG 17755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136470235716738