Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq3591 93.3 7e-14 seq273 91.5 2e-13 seq1187 84.2 3e-11 >seq3591 Length=4483 Score = 93.3 bits (102), Expect = 7e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 169733 GTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCCG 169792 |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||| Sbjct 699 GTAGCTCAGTTGGT-TAGAGCGCCGCCCTGTCACGGCGGAGGCCGCGGGTTCGAGTCCCG 641 Query 169793 TCAGTCCTGCCATTTTTA 169810 || || |||| | ||| Sbjct 640 TCTCTCGCGCCAGTCTTA 623 >seq273 Length=30430 Score = 91.5 bits (100), Expect = 2e-13 Identities = 60/65 (92%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 |||||| |||||||| ||| ||||||||||||||||||||||||||||||||| || ||| Sbjct 3459 TGTAGCGCAGTTGGT-TAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAGTCCC 3517 Query 169792 GTCAG 169796 ||||| Sbjct 3518 GTCAG 3522 >seq1187 Length=13541 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 167017 AGTATTCTAGGGGCATAGCTCAGCTGGCAGAGCACCGGTCTCCAAAACCGGGTGTCCAAG 167076 ||| || ||||||||||||||| ||||||||| ||||||||||||||| || || Sbjct 191 AGTGTTTTAGGGGCATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAG 250 Query 167077 GTTCGAATCCTTGTGCCCCTGCCA 167100 |||||| |||| ||||||||||| Sbjct 251 GTTCGATTCCTACTGCCCCTGCCA 274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777554246520400