Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq1741 269 3e-67 seq4322 89.7 6e-13 seq951 86.0 7e-12 seq5 82.4 8e-11 >seq1741 Length=9891 Score = 269 bits (298), Expect = 3e-67 Identities = 304/407 (75%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 162723 ACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGAC 162782 || || ||||||||||| | |||||||| || ||||||||||| || ||| || Sbjct 4 ACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTTAAC 63 Query 162783 TCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATT 162842 | || || | |||||||| ||||| ||||| || || ||||| ||||||||||| ||| Sbjct 64 CCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAAATT 123 Query 162843 TTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTC 162902 || ||| | |||||| ||||| |||||||| || || |||||| | |||||||| || Sbjct 124 TTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCAGTA 183 Query 162903 ATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTAC 162962 | ||||| |||| ||| |||| ||| || | || | ||| | || | |||||||| Sbjct 184 ACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCTTTAAACTTACGTGCTTAT 243 Query 162963 GACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTTCTATACA 163022 || || || || |||||| |||| || || ||||| |||||||| || || ||||||||| Sbjct 244 GATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTATACA 303 Query 163023 AAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCAACCTCAT 163082 || || |||||| | || ||||| |||| || ||| | || | || || |||||| Sbjct 304 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCAT 363 Query 163083 GAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 || || |||| |||||||| ||||| || ||| | || |||||||| Sbjct 364 GAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 410 >seq4322 Length=3425 Score = 89.7 bits (98), Expect = 6e-13 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 157686 TTTA-CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGT 157744 |||| |||| |||||||||| |||||||||| || ||||||| || ||||||||||| Sbjct 2420 TTTATCGGGATGTAGCGCAGTTTGGTAGCGCTCCTGTTTTGGGAACAGGAGGTCGCAGGT 2361 Query 157745 TCGAATCCTGTCACCCCGA 157763 ||||||||||||| ||||| Sbjct 2360 TCGAATCCTGTCATCCCGA 2342 >seq951 Length=15986 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 157689 ACGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGA 157748 ||||||||| |||||||||||||||||| | || |||| | ||| ||||||||| | Sbjct 8386 ACGGGGTGTGGCGCAGCTTGGTAGCGCGCGTCGTTCGGGACGACGAGGCCGCAGGTTCAA 8445 Query 157749 ATCCTGTCACCCCGACT 157765 ||||||||||||||||| Sbjct 8446 ATCCTGTCACCCCGACT 8462 >seq5 Length=148305 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749 ||||| ||||| ||||||||||| ||| ||||||||||| | ||||||||||| || Sbjct 79772 CGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAAGTCGCAGGTTCAAA 79713 Query 157750 TCCTGTCACCCCGAC 157764 ||||||| ||||||| Sbjct 79712 TCCTGTCGCCCCGAC 79698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547692432126840