Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1741 201 2e-46 seq113 104 3e-17 >seq1741 Length=9891 Score = 201 bits (222), Expect = 2e-46 Identities = 250/340 (74%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 23459 CATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGA 23518 |||||| |||| | || | ||| || | ||||||||| || ||||| || || || Sbjct 342 CATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGAAAGTTTCGAACTC 283 Query 23519 ACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACG-AAGATTAAGAG 23577 | |||||| ||||| ||||| ||||| || |||||||||||||| ||| |||| || Sbjct 282 AGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATAAGCACGTAAGTTTAA-AG 224 Query 23578 CAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAA 23637 | | || | | ||||||| | | ||||||||| | || |||||||| ||||||| Sbjct 223 CTAAACCTACAACACCAATAGCACTCATCCAAAGACCAGTTACTGGAACAAATAACATAA 164 Query 23638 AGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGAT 23697 | ||||| |||||||| || || ||| || || || || ||||||||||| ||||| | Sbjct 163 AAAAGTGTAACCAACGTTTGTTTGAAAAAGCTACACCAAAAATTTGTGACCAGAAACGGT 104 Query 23698 TTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGTGT 23757 |||| || ||||| ||||| || || || | ||||| | | ||||| ||||||| Sbjct 103 TTGCGGTTACCATTGAATATGTTTCTTCAGCTTGAGTTGGGTTAAACGCACGGAAAGTGT 44 Query 23758 TTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGT 23797 |||| || ||||||||| | |||||||| || ||||| Sbjct 43 TTGCACCATCACCATCTTCAAAAAGTGTATTTTCTACAGT 4 >seq113 Length=41445 Score = 104 bits (114), Expect = 3e-17 Identities = 248/375 (66%), Gaps = 0/375 (0%) Strand=Plus/Minus Query 47944 GTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATA 48003 || ||||| || || || || || || || || | || ||||| || || || || || Sbjct 23250 GTGATCTTGCGCGTCACGAAGGTCTCGCCGCGCTTGGGCGATTCGTGGTTGAACAGGATC 23191 Query 48004 CCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAG 48063 || | ||||||||||| ||||| | || || |||||| |||||||| | || Sbjct 23190 CCGTTGCAGGCATACATGCCGTAGGCCTCGCGGTAGTTCACGCTGATCCAGTAGGCGTAC 23131 Query 48064 AGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTC 48123 || || || | | || || || |||||||| || ||| | || ||| || || Sbjct 23130 AGCTTGGCCGCGGCGTAGGGGCTGCGGGGATAGAACGGCGTGCTTTCGCGCTGCGGCGTT 23071 Query 48124 TCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCC 48183 || |||||| || || || || ||| || || || |||| || || | || ||| Sbjct 23070 TCCTGCACCAGCCCGTACAGCTCGGAGGTCGAGGCCTGGTAGAAGCGCGCCTTGTCCTCC 23011 Query 48184 ATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCA 48243 | || || | |||| || || |||| | ||||||||| | | | || | | | Sbjct 23010 AGCTTGAGGATGCGGATGGCTTCCAGCAGGCGCAGGGTGCCCAGGCCGTCGGCGTTGGCG 22951 Query 48244 GTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATC 48303 || ||||| ||| || ||||| ||| || || ||||| ||| | || || || ||| Sbjct 22950 GTGTACTCCGGCTCTTCGAACGACACCCCGACGTGGCTCTGCGCCGCCAGGTTGTAGATC 22891 Query 48304 TCATCTGGTTGAACC 48318 || || ||||| ||| Sbjct 22890 TCGTCGGGTTGCACC 22876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665427858878680