Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq1741 259 5e-64 seq224 89.7 6e-13 >seq1741 Length=9891 Score = 259 bits (286), Expect = 5e-64 Identities = 306/412 (74%), Gaps = 2/412 (0%) Strand=Plus/Plus Query 167620 ACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTAAGGCATTCGAT 167679 || ||||| ||||| | | |||||||||||| ||||||||||| || || | Sbjct 4 ACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTTAAC 63 Query 167680 TCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATC 167739 | ||||| | ||||| || ||||||||||| || |||||||| |||||||| || || Sbjct 64 CCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAAATT 123 Query 167740 TTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTT 167799 || || | ||||| |||||||| ||| | || || ||||||||||| ||||| || Sbjct 124 TTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCAGTA 183 Query 167800 ATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTT-CGTGCTTA 167858 | || ||||||| | ||||| | | ||| | ||| |||| ||| |||||||| Sbjct 184 ACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCT-TTAAACTTACGTGCTTA 242 Query 167859 CGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATAC 167918 ||||||||||| ||||| || | || ||||| ||||| ||||| |||||||||||||| Sbjct 243 TGATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTATAC 302 Query 167919 TAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGATCAACCTCA 167978 ||||| || ||| | || |||||| |||| || ||| | || || ||||| ||||| Sbjct 303 AAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCA 362 Query 167979 TGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030 ||| || |||| ||||| ||||| ||| | ||||| || ||||| || ||| Sbjct 363 TGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCTTTAA 414 >seq224 Length=33074 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 18008 CGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 18067 ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 10324 CGGGGCCTTAGCTCAGCTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAA 10265 Query 18068 TCCGCTATTCTCCA 18081 || ||| ||||| Sbjct 10264 TCTCCTAGGCTCCA 10251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561191882215600