Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq7728 134 2e-26 seq1826 129 8e-25 seq1162 113 6e-20 seq12 111 2e-19 seq1545 93.3 6e-14 >seq7728 Length=1087 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| || || || || |||||||| || |||||| | Sbjct 48 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTAGATGTTGAGCCCAGC 107 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || | || ||||| || || |||||||| || || || |||||| Sbjct 108 GACACAATCGAGAATGTGAAGCAAAAGATCCAGGACAAGGAAGGGATCCCCCCTGATCAG 167 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || || ||||| || || || || || || | || |||||| Sbjct 168 CAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTTTCGGACTACAAC 227 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 |||| |||||||| || | ||||| ||||| Sbjct 228 ATTCAGAAGGAGTCCACATTGCACCTGGTTCT 259 >seq1826 Length=9519 Score = 129 bits (142), Expect = 8e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 ||||| || | ||||| ||||||| || || || || || ||||| || |||||||| Sbjct 1085 TGTGTGGGCCTGTGGCAGCATGATCGCGTGGAAATCATTCCCAATGAGCAGGGAAACCGC 1144 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 || || || ||||| || || || || || | ||| || | |||| ||||| || || Sbjct 1145 ACTACGCCCTCGTATGTGGCTTTCACCGACACTGAGCGCTTGATTGGGGATGCTGCCAAG 1204 Query 195452 AATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGC 195511 || || || |||||||| ||||| ||||| ||||| || ||||| || ||||| ||| Sbjct 1205 AACCAAGTGGCCATGAACCCCATCAACACTGTGTTTGATGCCAAGCGGCTCATTGGGCGC 1264 Query 195512 AAGTTTTCGGA 195522 ||||||||||| Sbjct 1265 AAGTTTTCGGA 1275 Score = 89.7 bits (98), Expect = 7e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 196052 AATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCT 196111 || ||| | || || || || || | || | ||||| ||||||||||| ||||| ||| Sbjct 2842 AACCCTCGTGCCCTCCGGCGCCTGCGTACCTCTTGTGAGCGTGCCAAACGCACTCTTTCT 2901 Query 196112 TCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA 196171 || || | ||| || |||||||||| || || | || || || ||||||||| | Sbjct 2902 TCCTCGACCCAAGCATCTATTGAGATTGACTCTTTATACGAGGGCATCGACTTCTATTCC 2961 Query 196172 ACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAA 196231 | ||||| || || || ||||| ||| | ||| || | || | || || |||||| Sbjct 2962 TCCATTACGCGCGCTCGATTTGAGGAGCTCAACATGGACCTTTTCCGCAAATGCATGGAA 3021 Query 196232 CCTGTTGAA 196240 ||||| ||| Sbjct 3022 CCTGTGGAA 3030 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 196736 GGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATT 196795 || ||||| || || | ||||| |||||| | | || || | || ||| || Sbjct 4149 GGCATTCTCAATGTTTCTGCTGAAGACAAGACCACCGGGAACAAAAACAAAATTACCATC 4208 Query 196796 ACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAA 196855 ||||| ||||||||||| || |||||| |||||||| || ||||||||||| || || Sbjct 4209 ACCAACGACAAGGGGCGCCTCAGTAAGGATGAAATTGAGCGCATGGTTCAAGAGGCTGAG 4268 Query 196856 AAGTACAGGGAAGAAGACGAG 196876 ||||||| | ||| |||||| Sbjct 4269 AAGTACAAAGCAGAGGACGAG 4289 >seq1162 Length=13745 Score = 113 bits (124), Expect = 6e-20 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 || || || ||||| |||||||| ||||| ||||| || || || ||||| || || ||| Sbjct 13745 ATGCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTGATCTTTGCGGGCAAGCAG 13686 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 ||||| ||||| || ||||| ||||| |||||| | ||||||||||| || || ||||| Sbjct 13685 CTTGAGGATGGGCGCACCCTGGCTGACTACAACATCCAAAAGGAGTCCACCCTCCACCTG 13626 Query 172069 GTTCT 172073 || || Sbjct 13625 GTGCT 13621 >seq12 Length=84225 Score = 111 bits (122), Expect = 2e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 171948 GATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACA 172007 ||| || || ||||| |||||||| ||||| ||||| || || || ||||| || || || Sbjct 186 GATGCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTGATCTTTGCGGGCAAGCA 127 Query 172008 GCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCT 172067 |||||| ||||| || ||||| ||||| |||||| | ||||||||||| || || ||| | Sbjct 126 GCTTGAGGATGGGCGCACCCTGGCTGACTACAACATCCAAAAGGAGTCCACCCTCCACTT 67 Query 172068 TGTTCT 172073 || || Sbjct 66 GGTGCT 61 >seq1545 Length=10919 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||||||||| ||||| ||| Sbjct 10552 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCTTCA 10611 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||||||||| || | || || |||||||| || ||||| || Sbjct 10612 GACACAATCGAGAATGTGAAGGCTAAGATTCAGGACAAGGAGGG 10655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657796621983280