Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq1741 293 3e-74 seq224 87.8 2e-12 >seq1741 Length=9891 Score = 293 bits (324), Expect = 3e-74 Identities = 312/412 (76%), Gaps = 0/412 (0%) Strand=Plus/Minus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || | ||| || || |||||||||| |||||||| || | Sbjct 415 ATTAAAGAGCGTTTCCACGTGGTAAAACCTCCTCAGGGAATACAAGTTTTTCATGAGGCT 356 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || |||| ||| ||||||| |||||| || || ||||| || ||||| |||| Sbjct 355 GATCTTGAGCAGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTTGTATAGA 296 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | || |||||||| || ||||| || || | || ||||| || || || |||||||||| Sbjct 295 AAGTTTCGAACTCAGGATCTTCCGCAGCGCGAATTTCTTGTGAAACGAAATCATAAGCAC 236 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | | ||| | ||| | ||| | || ||| || | ||| |||||||||| | || |||| Sbjct 235 GTAAGTTTAAAGCTAAACCTACAACACCAATAGCACTCATCCAAAGACCAGTTACTGGAA 176 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| |||||||| || || ||||| | || || ||| || | |||||| || || | Sbjct 175 CAAATAACATAAAAAAGTGTAACCAACGTTTGTTTGAAAAAGCTACACCAAAAATTTGTG 116 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 ||||||| |||||||| || |||||||| || |||||||| ||||||| | || || | Sbjct 115 ACCAGAAACGGTTTGCGGTTACCATTGAATATGTTTCTTCAGCTTGAGTTGGGTTAAACG 56 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGT 66997 | |||||||||||| |||||||||||| | || ||||| ||||| || Sbjct 55 CACGGAAAGTGTTTGCACCATCACCATCTTCAAAAAGTGTATTTTCTACAGT 4 >seq224 Length=33074 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881 ||||| ||||||| ||||||||||||| ||||| ||||||||||| ||||||||| || Sbjct 10251 TGGAGCCTAGGAGATTCGAACTCCTGACATCCTGCTTGCAAAGCAGGCGCTCTACCAGCT 10310 Query 35882 GAGCTAATTCCCC 35894 ||||||| |||| Sbjct 10311 GAGCTAAGGCCCC 10323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571997201710680