Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_021305.1 Length=76179 Score E Sequences producing significant alignments: (Bits) Value seq706 401 3e-107 seq240 334 4e-87 seq5 100 1e-16 >seq706 Length=18769 Score = 401 bits (444), Expect = 3e-107 Identities = 577/806 (72%), Gaps = 13/806 (2%) Strand=Plus/Plus Query 65727 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 65786 || || ||||| |||||||| || ||||| || |||| ||| || ||| |||| || Sbjct 13747 GTCGAAGTCATCCCCACCGGTTCCATCGCCCTCGACGTCGCCCTCGGCGTCGGTGGTCTT 13806 Query 65787 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 65846 || | ||||| | | || |||||||| || || || || || ||| | || ||| Sbjct 13807 CCTCGCGGCCGCATCATCGAGATCTACGGTCCGGAGTCGTCGGGTAAGACCACGCTGACC 13866 Query 65847 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 65906 ||||||||| | ||||| | |||| || || |||| |||||| | ||||||||| ||| Sbjct 13867 CTCCACGCGATCGCCAACGTGCAGCGCGCGGGCGGCATCGCCGCATTCATCGACGCCGAG 13926 Query 65907 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 65966 ||| | || ||||| || |||||| | |||||| || ||| ||||| | || | || Sbjct 13927 CACGCGCTCGACCCCGACTACGCCGCGAAGCTCGGCGTCGACATCGACCAGCTGCTCGTC 13986 Query 65967 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66026 ||||| ||||| || |||||||| || ||||||| ||| | ||||| || ||| Sbjct 13987 TCGCAGCCCGACACCGGTGAGCAGGCGCTCGAGATCGCCGACATGCTCGTGCGTTCGGGC 14046 Query 66027 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66086 | | | | |||||| | ||||| || || ||||| || || |||||| ||||| Sbjct 14047 GCAATCGACCTGGTCGTCATCGACTCGGTCGCCGCCCTCGTCCCCAAGGCCGAGATCGAA 14106 Query 66087 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 66146 ||||| || || ||| ||||| |||||||| |||||| | ||||||||||| | || Sbjct 14107 GGCGAGATGGGCGACTCGCACGTGGGCCTGCAGGCGCGCTTGATGTCGCAGGCGCTCCGG 14166 Query 66147 AAGCTCACTGG-CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCG 66205 |||||||| || || |||| ||||| || || ||| |||||||| |||| Sbjct 14167 AAGCTCACCGGTGGCCTGAACCAG-ACCAAGACCACCGCGATCTTCATCAACCAGCTGCG 14225 Query 66206 CGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTT 66265 |||||||||||| ||| || |||| || ||||||||| | ||||| ||||| | Sbjct 14226 CGAGAAGATCGG---CGTCTTCTTCGGCTCGCCCGAGACCACTGCCGGCGGGAAGGCGCT 14282 Query 66266 GAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 66325 | ||||||||| || || ||| | || |||| ||||||| || |||||| || Sbjct 14283 CAAGTTCTACGCGTCGGTACGCCTCGACATCCGCCGCATCGAGACGCTGAAGGACGGTAC 14342 Query 66326 TGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCA 66385 || || ||||| |||||||| || || |||||||||||||||||| |||| ||||| Sbjct 14343 CGACGCGGTCGGTAACCGCACTCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTT 14402 Query 66386 CCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAA--CTC 66443 | | || |||||| | || ||| ||| |||||||||||| || | ||| ||| Sbjct 14403 CAAGCAGGCGGAGTTCGACATCCTGTTCGGCACGGGCATCTCGCGCGAAG--GAAGCCTC 14460 Query 66444 CTCGACCTGGCCGTGTC--GCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66501 ||||| | | ||||| ||| ||| | || ||||||||||| ||||||| || |||| Sbjct 14461 ATCGACTT--CGGTGTCGAGCACGGCATCGTCAAGAAGTCGGGTGCCTGGTACACCTACG 14518 Query 66502 GGGACAAGAACGTCGCTCAGGGCAAG 66527 | | || | ||| |||||||||| Sbjct 14519 ACGGCGAGCAGCTCGGTCAGGGCAAG 14544 >seq240 Length=32197 Score = 334 bits (370), Expect = 4e-87 Identities = 546/786 (69%), Gaps = 3/786 (0%) Strand=Plus/Plus Query 65742 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 65801 |||||||| | | ||||||| ||| |||||| |||| || ||| | ||||| ||| Sbjct 30985 ACCGGCTCGCTGGGTCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCGTG 31044 Query 65802 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 65861 |||||||||||||| || ||||| || || ||| | || ||| || || | ||||| Sbjct 31045 GTGGAAATCTACGGTCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGTCGTGGCT 31104 Query 65862 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCT 65921 | ||| ||| ||| |||| | ||||| | ||||||| || ||| | |||||| Sbjct 31105 GAAATGCAAAAGATCGGCGGCACCTGCGCCTTCGTCGACGCCGAACACGCGCTGGACGTG 31164 Query 65922 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACT 65981 |||||||| | ||| || || |||| | | |||| || | ||||||||||| Sbjct 31165 CAGTACGCCTCGAAGCTGGGCGTCAACCTGGCCGACCTGCTGATCTCGCAGCCGGACACG 31224 Query 65982 GGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTC 66041 || |||||||| ||||| ||| ||| || || || || | | | | || Sbjct 31225 GGTGAGCAGGCGCTGGAAATCACCGACGCGCTGGTGCGCTCGGGTTCGGTCGACCTGATC 31284 Query 66042 GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGAC 66101 || || ||||| || |||||||||||||| ||||| |||||||||| || || || Sbjct 31285 GTGGTCGACTCGGTCGCGGCCCTGGTGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGAT 31344 Query 66102 AGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACC 66161 | ||||||||| || ||||| ||| ||||| |||||||||| || | |||| Sbjct 31345 TCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCACC 31404 Query 66162 ATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAAC 66221 ||| | |||||| || ||| |||||||| | ||| ||||||||| | Sbjct 31405 ATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGG---C 31461 Query 66222 GTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCA 66281 ||| | |||| ||| |||||||| |||||||| || | | |||||||||||| Sbjct 31462 GTGATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACGCGCTCAAGTTCTACGCCTCG 31521 Query 66282 GTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAAC 66341 || ||| |||| |||| ||||||| | | ||| | ||||| |||| ||||||||| Sbjct 31522 GTGCGCCTGGACATCCGCCGCATCGGCTCGATCAAGAAGGGCGACGAGGTCGTCGGCAAC 31581 Query 66342 CGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTC 66401 ||||| || ||||| |||||||||||| | || || ||| | | ||||||||| Sbjct 31582 GAAACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCGCCCCCGTTCAAGCAGGCCGAGTTC 31641 Query 66402 TCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCG 66461 | || ||||||| | ||||||||||| || | |||| || ||||||||| |||| | Sbjct 31642 GACATCATGTACGGCGCCGGCATCTCGCGCGAAGGCGAAATCATCGACCTGGGCGTGGCC 31701 Query 66462 CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAG 66521 | ||||| | ||||| ||||| |||| || ||| | ||| | ||| ||| Sbjct 31702 GCCAACGTGGTGGACAAGTCCGGCGCGTGGTACAGCTACAACGGCAACCGCATCGGCCAG 31761 Query 66522 GGCAAG 66527 |||||| Sbjct 31762 GGCAAG 31767 >seq5 Length=148305 Score = 100 bits (110), Expect = 1e-16 Identities = 210/304 (69%), Gaps = 13/304 (4%) Strand=Plus/Minus Query 60181 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 60240 |||| |||| ||| || ||||||||||||||||||| ||| || |||| | |||||| Sbjct 31288 TCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAGAACGGGCTGCCCGTCG 31229 Query 60241 CCAACTTCACCGTCGTGTCCAACGAACGCCGC-CG--CGACGCCCAAGGCAAC---TGGG 60294 | ||||||||| ||| ||| | | | |||| || |||| || | ||| ||| Sbjct 31228 CGAACTTCACCATCGCGTCGACC---CCCCGCACGTTCGACCGTCAGGCGAACGAGTGGA 31172 Query 60295 TCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAG 60354 |||||||| ||| ||||| || | ||||||| || ||||||| |||| | Sbjct 31171 AGGACGGCGAGGCCCTGTTCCTGCGGGCGTCGGTCTGGCGTGAGTTCGCCGAGCACGTGG 31112 Query 60355 CGGAAAGCCTCCAGAAAGGCCAG-CGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCC 60413 ||| || | |||| ||| || ||||||| | || || ||||||||| Sbjct 31111 CGGGTTCGCT-GACCAAGGGCAGCCGTGTCATCGCGACCGGTCGTCTGCGTCAGCGCTCC 31053 Query 60414 TTCGA-GACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGG 60472 | | | |||| | |||| | | ||||||| |||||| | ||||| ||||||||||| Sbjct 31052 TACCAGGACCGTGACGGGC-AGACCCGCACCGCCATCGAACTCGAGGTGGACGAGATCGG 30994 Query 60473 CCCG 60476 |||| Sbjct 30993 CCCG 30990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243624247289460