Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq706 407 7e-109 seq240 338 3e-88 seq5 100 1e-16 >seq706 Length=18769 Score = 407 bits (450), Expect = 7e-109 Identities = 578/806 (72%), Gaps = 13/806 (2%) Strand=Plus/Plus Query 65060 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 65119 || || ||||| |||||||| || ||||| || |||| ||| || ||| |||| || Sbjct 13747 GTCGAAGTCATCCCCACCGGTTCCATCGCCCTCGACGTCGCCCTCGGCGTCGGTGGTCTT 13806 Query 65120 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 65179 || | ||||| | | || |||||||| || || || || || ||| | || ||| Sbjct 13807 CCTCGCGGCCGCATCATCGAGATCTACGGTCCGGAGTCGTCGGGTAAGACCACGCTGACC 13866 Query 65180 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 65239 ||||||||| | ||||| | |||| || || |||| |||||| | ||||||||| ||| Sbjct 13867 CTCCACGCGATCGCCAACGTGCAGCGCGCGGGCGGCATCGCCGCATTCATCGACGCCGAG 13926 Query 65240 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 65299 ||| | || ||||| || |||||| | |||||| || ||| ||||| | || | || Sbjct 13927 CACGCGCTCGACCCCGACTACGCCGCGAAGCTCGGCGTCGACATCGACCAGCTGCTCGTC 13986 Query 65300 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 65359 ||||| ||||| || |||||||| || ||||||| ||| | ||||| || ||| Sbjct 13987 TCGCAGCCCGACACCGGTGAGCAGGCGCTCGAGATCGCCGACATGCTCGTGCGTTCGGGC 14046 Query 65360 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 65419 | | | | |||||| | ||||| || || ||||| || || |||||| ||||| Sbjct 14047 GCAATCGACCTGGTCGTCATCGACTCGGTCGCCGCCCTCGTCCCCAAGGCCGAGATCGAA 14106 Query 65420 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 65479 ||||| || || ||| ||||| |||||||| |||||| | ||||||||||| | || Sbjct 14107 GGCGAGATGGGCGACTCGCACGTGGGCCTGCAGGCGCGCTTGATGTCGCAGGCGCTCCGG 14166 Query 65480 AAGCTCACCGG-CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCG 65538 ||||||||||| || |||| ||||| || || ||| |||||||| |||| Sbjct 14167 AAGCTCACCGGTGGCCTGAACCAG-ACCAAGACCACCGCGATCTTCATCAACCAGCTGCG 14225 Query 65539 CGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTT 65598 |||||||||||| ||| || |||| || ||||||||| | ||||| ||||| | Sbjct 14226 CGAGAAGATCGG---CGTCTTCTTCGGCTCGCCCGAGACCACTGCCGGCGGGAAGGCGCT 14282 Query 65599 GAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 65658 | ||||||||| || || ||| | || |||| ||||||| || |||||| || Sbjct 14283 CAAGTTCTACGCGTCGGTACGCCTCGACATCCGCCGCATCGAGACGCTGAAGGACGGTAC 14342 Query 65659 TGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCA 65718 || || ||||| |||||||| || || |||||||||||||||||| |||| ||||| Sbjct 14343 CGACGCGGTCGGTAACCGCACTCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTT 14402 Query 65719 CCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAA--CTC 65776 | | || |||||| | || ||| ||| |||||||||||| || | ||| ||| Sbjct 14403 CAAGCAGGCGGAGTTCGACATCCTGTTCGGCACGGGCATCTCGCGCGAAG--GAAGCCTC 14460 Query 65777 CTCGACCTGGCCGTGTC--GCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 65834 ||||| | | ||||| ||| ||| | || ||||||||||| ||||||| || |||| Sbjct 14461 ATCGACTT--CGGTGTCGAGCACGGCATCGTCAAGAAGTCGGGTGCCTGGTACACCTACG 14518 Query 65835 GGGACAAGAACGTCGCTCAGGGCAAG 65860 | | || | ||| |||||||||| Sbjct 14519 ACGGCGAGCAGCTCGGTCAGGGCAAG 14544 >seq240 Length=32197 Score = 338 bits (374), Expect = 3e-88 Identities = 547/786 (70%), Gaps = 3/786 (0%) Strand=Plus/Plus Query 65075 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 65134 |||||||| | | ||||||| ||| |||||| |||| || ||| | ||||| ||| Sbjct 30985 ACCGGCTCGCTGGGTCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCGTG 31044 Query 65135 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 65194 |||||||||||||| || ||||| || || ||| | || ||| || || | ||||| Sbjct 31045 GTGGAAATCTACGGTCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGTCGTGGCT 31104 Query 65195 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCT 65254 | ||| ||| ||| |||| | ||||| | ||||||| || ||| | |||||| Sbjct 31105 GAAATGCAAAAGATCGGCGGCACCTGCGCCTTCGTCGACGCCGAACACGCGCTGGACGTG 31164 Query 65255 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACT 65314 |||||||| | ||| || || |||| | | |||| || | ||||||||||| Sbjct 31165 CAGTACGCCTCGAAGCTGGGCGTCAACCTGGCCGACCTGCTGATCTCGCAGCCGGACACG 31224 Query 65315 GGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTC 65374 || |||||||| ||||| ||| ||| || || || || | | | | || Sbjct 31225 GGTGAGCAGGCGCTGGAAATCACCGACGCGCTGGTGCGCTCGGGTTCGGTCGACCTGATC 31284 Query 65375 GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGAC 65434 || || ||||| || |||||||||||||| ||||| |||||||||| || || || Sbjct 31285 GTGGTCGACTCGGTCGCGGCCCTGGTGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGAT 31344 Query 65435 AGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACC 65494 | ||||||||| || ||||| ||| ||||| |||||||||| |||| |||| Sbjct 31345 TCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCACC 31404 Query 65495 ATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAAC 65554 ||| | |||||| || ||| |||||||| | ||| ||||||||| | Sbjct 31405 ATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGG---C 31461 Query 65555 GTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCA 65614 ||| | |||| ||| |||||||| |||||||| || | | |||||||||||| Sbjct 31462 GTGATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACGCGCTCAAGTTCTACGCCTCG 31521 Query 65615 GTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAAC 65674 || ||| |||| |||| ||||||| | | ||| | ||||| |||| ||||||||| Sbjct 31522 GTGCGCCTGGACATCCGCCGCATCGGCTCGATCAAGAAGGGCGACGAGGTCGTCGGCAAC 31581 Query 65675 CGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTC 65734 ||||| || ||||| |||||||||||| | || || ||| | | ||||||||| Sbjct 31582 GAAACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCGCCCCCGTTCAAGCAGGCCGAGTTC 31641 Query 65735 TCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCG 65794 | || ||||||| | ||||||||||| || | |||| || ||||||||| |||| | Sbjct 31642 GACATCATGTACGGCGCCGGCATCTCGCGCGAAGGCGAAATCATCGACCTGGGCGTGGCC 31701 Query 65795 CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAG 65854 | ||||| | ||||| ||||| |||| || ||| | ||| | ||| ||| Sbjct 31702 GCCAACGTGGTGGACAAGTCCGGCGCGTGGTACAGCTACAACGGCAACCGCATCGGCCAG 31761 Query 65855 GGCAAG 65860 |||||| Sbjct 31762 GGCAAG 31767 >seq5 Length=148305 Score = 100 bits (110), Expect = 1e-16 Identities = 210/304 (69%), Gaps = 13/304 (4%) Strand=Plus/Minus Query 59514 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 59573 |||| |||| ||| || ||||||||||||||||||| ||| || |||| | |||||| Sbjct 31288 TCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAGAACGGGCTGCCCGTCG 31229 Query 59574 CCAACTTCACCGTCGTGTCCAACGAACGCCGC-CG--CGACGCCCAAGGCAAC---TGGG 59627 | ||||||||| ||| ||| | | | |||| || |||| || | ||| ||| Sbjct 31228 CGAACTTCACCATCGCGTCGACC---CCCCGCACGTTCGACCGTCAGGCGAACGAGTGGA 31172 Query 59628 TCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAG 59687 |||||||| ||| ||||| || | ||||||| || ||||||| |||| | Sbjct 31171 AGGACGGCGAGGCCCTGTTCCTGCGGGCGTCGGTCTGGCGTGAGTTCGCCGAGCACGTGG 31112 Query 59688 CGGAAAGCCTCCAGAAAGGCCAG-CGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCC 59746 ||| || | |||| ||| || ||||||| | || || ||||||||| Sbjct 31111 CGGGTTCGCT-GACCAAGGGCAGCCGTGTCATCGCGACCGGTCGTCTGCGTCAGCGCTCC 31053 Query 59747 TTCGA-GACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGG 59805 | | | |||| | |||| | | ||||||| |||||| | ||||| ||||||||||| Sbjct 31052 TACCAGGACCGTGACGGGC-AGACCCGCACCGCCATCGAACTCGAGGTGGACGAGATCGG 30994 Query 59806 CCCG 59809 |||| Sbjct 30993 CCCG 30990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242206785488183