Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_021533.1 Length=45942 Score E Sequences producing significant alignments: (Bits) Value seq15 84.2 6e-12 seq1187 80.6 8e-11 >seq15 Length=81684 Score = 84.2 bits (92), Expect = 6e-12 Identities = 67/78 (86%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 3874 GGGTCTTTTAGGCGCGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCA 3933 |||||| | |||| ||||||||||||| ||||| |||||||||||| |||| || |||| Sbjct 16566 GGGTCTCTAGGGCG-GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCA 16624 Query 3934 GGTTCGAGTCCTG-CCGC 3950 ||||||| ||||| |||| Sbjct 16625 GGTTCGATTCCTGTCCGC 16642 >seq1187 Length=13541 Score = 80.6 bits (88), Expect = 8e-11 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 3876 GTCTTTTAGGCGCGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAGG 3935 || ||||||| || |||||||||||| |||||| ||||||||||| ||| || || ||| Sbjct 192 GTGTTTTAGGGGCATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAGG 251 Query 3936 TTCGAGTCCTGCCGCGTCTGCTAC 3959 ||||| |||| | || |||| || Sbjct 252 TTCGATTCCTACTGCCCCTGCCAC 275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146878846928352