Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq1741 266 4e-66 seq5 111 2e-19 seq224 87.8 2e-12 >seq1741 Length=9891 Score = 266 bits (294), Expect = 4e-66 Identities = 303/407 (74%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 152965 ACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTCGAC 153024 || ||||| ||||| | | | |||||||||| |||||||||||| || || || Sbjct 4 ACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTTAAC 63 Query 153025 AGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATA 153084 ||||||| ||||| || ||||| ||||| || || |||||||||||||| || || Sbjct 64 CCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAAATT 123 Query 153085 TTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTT 153144 ||||| | |||||| || ||||| ||| | || || |||||| | ||||| || || Sbjct 124 TTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCAGTA 183 Query 153145 ATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTAC 153204 | |||||||||| | ||||||| | | ||| | ||| | || | |||||||| Sbjct 184 ACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCTTTAAACTTACGTGCTTAT 243 Query 153205 GATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACG 153264 ||||| || || |||||||| | || | ||||||||||| || || || |||||||| Sbjct 244 GATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTATACA 303 Query 153265 AAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCAACCTCAT 153324 || ||||| ||||| ||||||||| ||||||||||| |||| || || || |||||| Sbjct 304 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCAT 363 Query 153325 GAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 || || | || |||||||| ||||| || ||||| || |||||||| Sbjct 364 GAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 410 >seq5 Length=148305 Score = 111 bits (122), Expect = 2e-19 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 148131 CGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAA 148190 ||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 79772 CGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAAGTCGCAGGTTCAAA 79713 Query 148191 TCCTGCCACCCCGA 148204 ||||| | |||||| Sbjct 79712 TCCTGTCGCCCCGA 79699 >seq224 Length=33074 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 9773 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 9832 |||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| | Sbjct 10323 GGGGCCTTAGCTCAGCTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAAT 10264 Query 9833 CCGCTATTCTCCA 9845 | ||| ||||| Sbjct 10263 CTCCTAGGCTCCA 10251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549567444630280