Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq17 129 7e-24 seq873 122 1e-21 seq907 113 6e-19 seq7177 105 8e-17 seq3793 105 8e-17 seq7056 93.3 5e-13 seq713 89.7 6e-12 seq244 87.8 2e-11 >seq17 Length=74467 Score = 129 bits (142), Expect = 7e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||||||| |||||||||| ||||| || || |||| | | ||||||||| Sbjct 2623 GCTGCCAACTACCTCAACATCAAGCCGCTGCTGGACCTCACGTGCTTGACGGTGGCCAAC 2682 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||| |||| |||||||||||||||||||| |||||| || Sbjct 2683 ATGATCAAGGGCAAGACGCCTGAGGAGATCCGCAAGACCTTCAACATCGAG 2733 >seq873 Length=16725 Score = 122 bits (134), Expect = 1e-21 Identities = 230/334 (69%), Gaps = 6/334 (2%) Strand=Plus/Plus Query 92600 CTCGGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGAC 92659 |||||| | |||||| ||||| ||||| | ||| | |||| || |||| ||||| Sbjct 3491 CTCGGCCACCTGGCGGCTGAGGTTTTCCTGGATCTGCAGGCGGCGGGCGTACATCTCGAC 3550 Query 92660 GATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGC 92719 |||||| | | |||| |||||| | | | |||| ||||||||||| |||| || || Sbjct 3551 GATGCGGGCCACCTTGGACAGGCCCAGCACCTTGCCGTTGGGCAGGTAGGCCACATGCGC 3610 Query 92720 CTTGCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCAC 92779 |||||| || |||||||||| |||||||| || | || | | |||| || || Sbjct 3611 CTTGCCGATGAAGGGCAGCATGTGGTGCTCACAGAGCGAATACAGCTCGATGTTCTTGAC 3670 Query 92780 GATCACCATCTCGCCCGAGGCCTCGGCAAAGAGCGCGTCGCCGATGGCCTCGGCCAGCGT 92839 | ||| ||||||| || | | || || |||||| | || | || |||| || Sbjct 3671 CAGCACGATCTCGCGCGTGTCGGAGGTGAACAGCGCGCCATTGACGATTTCATCCAG-GT 3729 Query 92840 CATGCG-GTGGCCGCGCGTGCGCTCCACCATGGCCTTGGCCACGCGCATCGGCGTGTCCA 92898 | || | || |||||| | | ||||||||||||| ||||| ||||||||| Sbjct 3730 CCTGGGTGTAGCCGCGGCACAGGTGGCGCATGGCCTTGGCCGCGCGCGCCGGCGTGTCGG 3789 Query 92899 GGAGGCCCTCGCGCCGCACG--TCCTCGCCCAGG 92930 ||||| ||||| | ||| || || |||||| Sbjct 3790 CCAGGCCTTCGCG--GGACGGATCTTCCCCCAGG 3821 >seq907 Length=16333 Score = 113 bits (124), Expect = 6e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| |||||||| | ||||| || | ||||||||||||||| ||||||||| Sbjct 11339 CCCTCGTCCCGACTGATGAGCTCGTTTGAGAAAGTGAGGCCGGGCATGAGTCCGCGCTTC 11280 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| |||||| || ||||| ||||||||||| || ||||| Sbjct 11279 TTGAGCCAGAAGATGGAGCAGAAGGACCCGGAGAAGAAGATGCCCTCCACACACGCAAAC 11220 Query 869300 CCGATGAGCCGCTCGGCAAA 869319 | || || ||||| ||||| Sbjct 11219 GCAATCAGACGCTCCGCAAA 11200 >seq7177 Length=1288 Score = 105 bits (116), Expect = 8e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 1630084 GTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGACTCGCCGTTGGTGCCCGCC 1630143 || || || || ||||| ||||| ||||||| ||||||| |||||| ||||| Sbjct 1247 GTATCATTGAACACGCGCAGCATTGGCACGATGCCGTTGCTAGTGCCGTTTGTGCCGCGA 1188 Query 1630144 ACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCGCCGGCCGACTTG 1630203 | ||| | ||||| |||||| | |||||| || | |||||||||||| || |||||| Sbjct 1187 ATGTACGAGCCGGTGGCGCGAATATTGTGCATGGACAGGCCGATGCCGCCAGCAGACTTG 1128 Query 1630204 GAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 |||||| ||||| | || || ||||| |||||||| Sbjct 1127 GAGATGCAGGCGCATTCCTTAAGTGTGTCATAGATGCC 1090 >seq3793 Length=4135 Score = 105 bits (116), Expect = 8e-17 Identities = 243/351 (69%), Gaps = 15/351 (4%) Strand=Plus/Minus Query 1726696 GGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCGTTCTTGAAGCC 1726755 ||||||| | ||||||| || || ||||| ||||||||||||||||||||||| Sbjct 2925 GGCGGCGACGATGGCGTCGGCCGCGATCTGCACGCCGCCGTCGGTGCCGTTCTTGAAGCC 2866 Query 1726756 GAT-GGCCAGCGGCAGTGCCGACGCC-ATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGC 1726813 | || |||| ||| |||| || | || |||||| |||| ||||| |||||| Sbjct 2865 CAGCGGGCAGCT-CAG-GCCGGAGCTGAGCTGGCGGTGGCTGGGGCTTTCGGTGGTGCGC 2808 Query 1726814 GCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA-AGGGGCCACCAGAGGACTGAG 1726872 ||||| | ||||||||| || | |||||| || | || | || | ||| | ||| Sbjct 2807 GCGCCGATGGCGCCCCAGGCGATCAGGTCGGCAATGTACTGCGGGCTGAGCAGGTC-GAG 2749 Query 1726873 AAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAG---GCGGCG 1726929 || ||| ||| | ||| | | | ||| || || || ||| ||| |||| | Sbjct 2748 GAATTCGGTGGCGATCGGCAGGCCCA-GGC--CGCTGATGTCCAGCAGCAGTTCGCGG-G 2693 Query 1726930 CGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAG 1726989 || || || |||||| ||| | |||| | ||||| ||| |||||| || Sbjct 2692 CG-CGGCG-CAGGCCTTCGTTGATGCGGAAGCTGCCGTCCAGGCGCGGGTCGTTGATGTA 2635 Query 1726990 GCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGAC 1727040 ||||||||| |||||||| ||||||||||| |||| ||| ||||||| || Sbjct 2634 GCCCTTCCAGCCGACGGTGGTGCGCGGCTTCTCGAAATACACGCGCATCAC 2584 >seq7056 Length=1336 Score = 93.3 bits (102), Expect = 5e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 507703 CACCATGCGATTCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGA 507762 |||| | || ||||||| ||||||| || | ||||||||||||||||| ||||| || Sbjct 203 CACCTTCCGCCTCAACCTCTCCGTCACCAGCCCATACAACGCCGACTTTGATGGCGATGA 144 Query 507763 GATGAACCTGCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACACCATGAG 507822 ||||||| ||||| || | ||| | | | |||||| ||| | | | | | |||| Sbjct 143 GATGAACATGCACTTGGCACAGAGCCACGAAGTGCGCGCTGAGATCAAGGAGATCATGGC 84 Query 507823 CGTGTCGCTCAAGACCGTGTCGCCGCAGG 507851 ||| | | ||| | |||||||||||||| Sbjct 83 GGTGCCACACAACATCGTGTCGCCGCAGG 55 >seq713 Length=18696 Score = 89.7 bits (98), Expect = 6e-12 Identities = 94/121 (78%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1726726 CACGCTCCCGTCGGTGCCGTTCTTGAAGCCGAT-GGCCAGCGGCAGTGCCGACGCCATCT 1726784 |||| | ||||| ||||| |||||||| || | || || || ||| | || |||| || Sbjct 4603 CACGTTGCCGTCCGTGCCATTCTTGAAACCCACCGGACA-CGACAGGCCGGATGCCAGCT 4661 Query 1726785 CGCGGTGCACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTG 1726844 |||| ||||||||||| || |||||||||||||| | || ||||| | |||||||| | Sbjct 4662 CGCGATGCACCTGGCTTTCCGTCGTGCGCGCGCCGATCGCCCCCCAGGAGACCAGGTCCG 4721 Query 1726845 C 1726845 | Sbjct 4722 C 4722 >seq244 Length=31859 Score = 87.8 bits (96), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||| || |||||||||| ||||| | |||| |||||| || ||||||||||| Sbjct 22499 CGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATACCAGTGTCGGGGTGCA 22440 Query 1254526 CCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| ||||||||||||||| Sbjct 22439 CCTGCTTCAGCACCTTGTAGATG 22417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106482764600683