Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_022052.1 Length=76050 Score E Sequences producing significant alignments: (Bits) Value seq5 102 4e-17 seq15 84.2 1e-11 >seq5 Length=148305 Score = 102 bits (112), Expect = 4e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 55441 GGGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCTGGCGTGGCGGTCGCTCA 55500 |||||||||||| || || || || ||| ||| | | | || || | ||||| | Sbjct 31284 GGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAGAACGGGCTGCCCGTCGCGAA 31225 Query 55501 GTTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAAGCAGACGAACGAGTGGGAGGACGG 55560 ||| | | ||||| || ||||||| |||| || ||| ||||||||||| ||||||| Sbjct 31224 CTTCACCATCGCGTCGACCCCCCGCACGTTCGACCGTCAGGCGAACGAGTGGAAGGACGG 31165 Query 55561 CGAAACCGTGTTCCTCCGTACGTCGGTGTGGCGTGAGCTTGCAGAGGGCGCGGC 55614 ||| || ||||||| || ||||||| ||||||||| | || ||| || ||| Sbjct 31164 CGAGGCCCTGTTCCTGCGGGCGTCGGTCTGGCGTGAGTTCGCCGAGCACGTGGC 31111 >seq15 Length=81684 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 64017 CGGTAGCTCAACTGGTAGAGCAGTGGTCTCCAAAGCCACCGGTTGCAGGTTCGACTCCTG 64076 ||||||||||| ||| ||||||| |||||||||| || | |||||||||||||| ||||| Sbjct 16578 CGGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 16637 Query 64077 TCCG 64080 |||| Sbjct 16638 TCCG 16641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243211487532429