Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq873 141 1e-27 seq235 131 3e-24 seq17 111 2e-18 seq2378 107 3e-17 seq907 104 4e-16 seq2294 93.3 7e-13 seq7177 87.8 3e-11 seq7056 86.0 1e-10 seq713 86.0 1e-10 >seq873 Length=16725 Score = 141 bits (156), Expect = 1e-27 Identities = 340/505 (67%), Gaps = 16/505 (3%) Strand=Plus/Plus Query 118539 AGGTTGAGAAACTCTTGGCGCGCCACG--GGGTCGTCGCGAATGTCGCCCAGGAGGACGC 118596 ||| |||| ||||| |||||| || |||| |||| | | |||||||| | ||| Sbjct 3324 AGGCTGAGGAACTC--GGCGCGGGTCGACGGGTTGTCGTGGAACTCGCCCAGCATCACGG 3381 Query 118597 GCGTGACCGTGTTTGACCCGTTCT----TGCGCACGCCGCGCATGCACACGCACATGTGG 118652 |||||| || ||| |||| | || ||||||||||| || ||||||||| Sbjct 3382 AGGTGACCATG---GACGAATTCTGCTTTTCG-ACGCCGCGCATCATCATGCACATGTGC 3437 Query 118653 AGGCCCTCGAGCACGACGCCGACGCCGCGCGCGCCCGTGACCTCGCTGATGCTC-TCGGC 118711 || |||||| || ||| | |||||| ||||| |||||| ||| | | ||||| Sbjct 3438 TGGGCCTCGATGACCACGGCCACGCCGGCGGCGCCGGTGACCGA-CTGCACCGCCTCGGC 3496 Query 118712 GATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATGTCGACGATGCG 118771 | |||||| |||| ||||| | ||| | |||| | | ||| ||||||||||| Sbjct 3497 CACCTGGCGGCTGAGGTTTTCCTGGATCTGCAGGCGGCGGGCGTACATCTCGACGATGCG 3556 Query 118772 CGGGATCTTGCTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCCTTGCC 118831 | | |||| |||||| | | | |||| |||||||||| |||| ||||||||||| Sbjct 3557 GGCCACCTTGGACAGGCCCAGCACCTTGCCGTTGGGCAGGTAGGCCACATGCGCCTTGCC 3616 Query 118832 GATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACGGTCAC 118891 ||| |||||||||| |||||||| || | || | | || |||| || ||| Sbjct 3617 GATGAAGGGCAGCATGTGGTGCTCACAGAGCGAATACAGCTCGATGTTCTTGACCAGCAC 3676 Query 118892 CATCTCGCCCGACGTC-TCGGCAAAGAGGGCGTCGCCGACGGCCTCGGCCAGGGTCAGGC 118950 ||||||| || ||| || || || ||| | |||| || ||||| | || Sbjct 3677 GATCTCGCGCG-TGTCGGAGGTGAACAGCGCGCCATTGACGATTTCATCCAGGTCCTGGG 3735 Query 118951 GGTGGCCGCGCGTGCGCTCCACCATGGCCTTGGCCACGCGCATGGGCGTGTCCAAGAGGC 119010 || |||||| | | ||||||||||||| ||||| |||||||| |||| Sbjct 3736 TGTAGCCGCGGCACAGGTGGCGCATGGCCTTGGCCGCGCGCGCCGGCGTGTCGGCCAGGC 3795 Query 119011 CCTCGCGCGCCACGTCCTCGCCCAG 119035 | ||||| | | || || ||||| Sbjct 3796 CTTCGCGGGACGGATCTTCCCCCAG 3820 >seq235 Length=32497 Score = 131 bits (144), Expect = 3e-24 Identities = 176/243 (72%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| |||||||||| ||||||| |||||| ||| Sbjct 25693 TGAACTTGGTGACGGCCTTGGTGCCCTCGCTGACGGCGTGCTTGGCCAGCTCGCCGGGCA 25752 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||| ||||||||||| |||||||||| || | || |||| || || | Sbjct 25753 GCACCAGGCGGACGGCGGTCTGAATCTCGCGGG---AAGTCAGGGTGGGCTTCTT-GTTC 25808 Query 1485590 GCGC----CAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAG 1485645 ||| ||| || | || ||| | | || || | | |||| || || ||| Sbjct 25809 ACGCGGCTCAGCTGGGCAGCGGCGGAGGCAATCTTCTCAAACTGGTCGGCGATGAAGGAG 25868 Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705 || | ||| | ||| || ||| ||||||||| ||| ||||| |||||||||||||| Sbjct 25869 TTGAGGATGGCCATGGACTTGGAGGAGATGCCGGTGTCAGGGTGAACCTGCTTGAGCACT 25928 Query 1485706 TTG 1485708 ||| Sbjct 25929 TTG 25931 >seq17 Length=74467 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || |||||||||||| |||||||||| || || || | |||| ||| ||||||||| Sbjct 2623 GCTGCCAACTACCTCAACATCAAGCCGCTGCTGGACCTCACGTGCTTGACGGTGGCCAAC 2682 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||| |||| ||||| |||||||||||||| |||||| || Sbjct 2683 ATGATCAAGGGCAAGACGCCTGAGGAGATCCGCAAGACCTTCAACATCGAG 2733 >seq2378 Length=7346 Score = 107 bits (118), Expect = 3e-17 Identities = 166/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 118659 TCGAGCACGACGCCGACGCCGCGCGCGCCCGTGACC-TCGCTGATGCTCTCGGCGATCTG 118717 |||||||||||| || || || ||| | | | || ||| |||| | ||||||||||| Sbjct 3786 TCGAGCACGACGAGCACCCCACGGGCGTC-GAGCCCGTCGGCGATGGTGTCGGCGATCTG 3728 Query 118718 G-CGCGTGAGCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATGTCGACGATGCGCGGGA 118776 ||| |||| ||||||||||| |||| |||| |||| ||||| | |||||||| Sbjct 3727 CTCGCCGAGGCGC-TCCTGCACCTGCGGGCGGGCCGACAGCACCTCGACCACGCGCGGGA 3669 Query 118777 TCTTGCTCAGGCCGATGATCCTGCCCGC-GGGCAGGTAGCCCACGTGCGCCTTGCCGATA 118835 | ||||| | || ||| | ||| ||| |||||| ||| |||||| |||| Sbjct 3668 GAGCACCGAGGCCCACGA-CCTTCTCGCCGGGGAGGTAGGCCAGGTGCGCTCGGCCGCGG 3610 Query 118836 AAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCA 118884 || |||||||| ||||||||||| | || ||||| |||||||||| Sbjct 3609 AACGGCAGCAGGTGGTGCTCGCAGACCGAACGGAAGTCGATGTCGCGCA 3561 >seq907 Length=16333 Score = 104 bits (114), Expect = 4e-16 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTT-GCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 || ||||| |||||||| | ||||| | |||| ||||||||||||||| |||||||| Sbjct 11339 CCCTCGTCCCGACTGATGAGCTCGTTTGAGAAAGT-GAGGCCGGGCATGAGTCCGCGCTT 11281 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| ||||| || ||||| ||||||||||| || ||||| Sbjct 11280 CTTGAGCCAGAAGATGGAGCAGAAGGACCCGGAGAAGAAGATGCCCTCCACACACGCAAA 11221 Query 794460 GCCGACGAGCCGCTCGGCAAA 794480 | | || ||||| ||||| Sbjct 11220 CGCAATCAGACGCTCCGCAAA 11200 Score = 87.8 bits (96), Expect = 3e-11 Identities = 119/164 (73%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 794502 GATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCG 794561 ||||||||| | |||||||| ||||| || | ||| ||||| || || || || | Sbjct 11052 GATCCACTTGAGCGCCCACTGCGCCTTCTTGCGCACTACTGGCACTGTCTCCATAGCATG 10993 Query 794562 AAAGAGGTGGTCCTTCTCGACCGG--GTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAG 794619 ||||| | |||||||| | ||| |||||||| ||| | || | || || ||| Sbjct 10992 GAAGAGCTTGTCCTTCTGG--CGGCTGTCCTTGATGTACGACTCCAGCAGCAGGCTGTAC 10935 Query 794620 GTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAA 794663 |||| |||||||| || ||||||||||||||||| ||||| Sbjct 10934 ATCTCGCTATGGATGTTCTCAATGGCGATCTGGAAGCCGTAAAA 10891 >seq2294 Length=7650 Score = 93.3 bits (102), Expect = 7e-13 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| ||| || ||| ||||||| |||||| ||| Sbjct 5525 TGAACTTGGTGACGGCCTTGGTGCCCTCACTGACAGCATGCTTGGCCAGCTCGCCGGGCA 5466 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 | || ||| || ||||||||||||||||| Sbjct 5465 ATACCAAGCGTACAGCGGTCTGGATCTCGCG 5435 >seq7177 Length=1288 Score = 87.8 bits (96), Expect = 3e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 2073559 GTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGACTCGCCGTTGGTGCCCGCC 2073618 || || || || ||||| ||||| ||||| | ||||||| |||||| ||||| Sbjct 1247 GTATCATTGAACACGCGCAGCATTGGCACGATGCCGTTGCTAGTGCCGTTTGTGCCGCGA 1188 Query 2073619 ACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCGCCGGCCGCCTTG 2073678 | ||| | ||| | |||||| | |||||| || | |||||||||||| || | |||| Sbjct 1187 ATGTACGAGCCGGTGGCGCGAATATTGTGCATGGACAGGCCGATGCCGCCAGCAGACTTG 1128 Query 2073679 GAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 |||||| ||||| | || || || || |||||||| Sbjct 1127 GAGATGCAGGCGCATTCCTTAAGTGTGTCATAGATGCC 1090 >seq7056 Length=1336 Score = 86.0 bits (94), Expect = 1e-10 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 429632 CACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGA 429691 ||||||||| |||||||| |||| || || | ||||||||||||||||| ||||| || Sbjct 203 CACCTTCCGCCTCAACCTCTCCGTCACCAGCCCATACAACGCCGACTTTGATGGCGATGA 144 Query 429692 GATGAACCTGCACGTGCCCCAG 429713 ||||||| ||||| || | ||| Sbjct 143 GATGAACATGCACTTGGCACAG 122 >seq713 Length=18696 Score = 86.0 bits (94), Expect = 1e-10 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 2175071 CACGCTGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTC 2175130 |||| ||||||| ||||| || || || || ||||| ||| ||| | || |||| || Sbjct 4603 CACGTTGCCGTCCGTGCCATTCTTGAAACCCACCGGACACGACAGGCCGGATGCCAGCTC 4662 Query 2175131 GCGGTGCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGC 2175190 ||| ||||||||||| || || ||||||||||| | || ||||| | || ||||| || Sbjct 4663 GCGATGCACCTGGCTTTCCGTCGTGCGCGCGCCGATCGCCCCCCAGGAGACCAGGTCCGC 4722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915395509886561