Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq180 114 1e-20 >seq180 Length=35712 Score = 114 bits (126), Expect = 1e-20 Identities = 379/576 (66%), Gaps = 29/576 (5%) Strand=Plus/Minus Query 143573 GCCCTGCACGACCTCGGCTACCTGCCTATTGAAGTCCGTGCTCTGCCCGAAGGCACCATG 143632 || ||| |||| || ||||| ||||| | ||| ||||| | |||||||||||| || | Sbjct 30061 GCGCTGTACGAGCTGGGCTATCTGCCGCTGGAAATCCGTTCCCTGCCCGAAGGCGCCC-G 30003 Query 143633 TGCCCGTATG-GTGTTCCGGTATATGTGATGTTC---AACACCTTGCCGGAGTTCTACTG 143688 | | || | || ||| || | ||| |||||| |||||| ||| ||| Sbjct 30002 CGTCGACATCCGCGTGCCGCCC---GTCACCTTCGTCAACACCAAGCCGGAATTCGCCTG 29946 Query 143689 GCTGACCAACTATCTGGAGACGGTGTTCAGCTCTGAGATATGGAAGCCGATGACGAACGC 143748 |||| || ||| | || ||| ||||||||| || ||||||||| || || Sbjct 29945 GCTGGTCACCTACATCGAAACGCTGTTCAGCTGCGAATCGTGGAAGCCGTCCACCGTGGC 29886 Query 143749 CACCATCGCCCTGCACTACA--AAGCACTGATGGTGAAAGCCGCTATCGCTACAGGCGTG 143806 |||||||||| | | || |||| || ||| | || |||| | | | Sbjct 29885 CACCATCGCCTTCGAATATCGCAAGCTCT-----TGAC--CTACT-TCGC--CCGCCTGA 29836 Query 143807 TCGCCGGACCATTGG--TTCATCGACTACCAAGGCCACGACTTCTCCTTCCGTGGTATGA 143864 || | | || ||| ||| || ||| ||||||||||||||||| | || || ||| Sbjct 29835 CCGGCAGCCCGATGGACTTCGTCAACTGGCAAGGCCACGACTTCTCGATGCGCGGCATGT 29776 Query 143865 GCGGGTGGCATGACGCGGCGTCTTCCGGTTCTGGCCATCTGGTGTTCTTCAAAGGCACCG 143924 ||| | | ||||| ||| | ||||| ||| ||| |||| ||||||| Sbjct 29775 CCGGCCTGTACGACGCCCGCAAGAGCGGCGCCGGCCACCTGCTGTCGTTCACCGGCACCG 29716 Query 143925 ACACCAACCCTGCTCTGGACTTCGTTGAAGAGTATTATGGCGCGGATATCGATGAAGACT 143984 |||||| ||| || | |||| | | ||||| || ||||| || ||| || Sbjct 29715 ACACCATCCCGGCCATCGACTACCTGGAAGACATCTACGGCGCCGACTCCGACCGCGAAC 29656 Query 143985 ATGTCGTTGCTGGCTCTGTTGCAGCCACCGAACACGCCGTGATGTGCATGGGCACGAAGG 144044 |||| || ||||| || | || ||||||||| | || |||||| |||||| |||| Sbjct 29655 TGGTCG--GC-GGCTCGGTGCCCGCGACCGAACACTCGGTCATGTGCCTGGGCAGCAAGG 29599 Query 144045 ATGGCGAGTTCGAAACCTTCGAGCGCCTGATCTCTAAAGTCTATCCGGACGGGAT--TGT 144102 | ||||| |||||||| || |||||| || | | |||||||||| ||| || ||| Sbjct 29598 AAGGCGAAATCGAAACCATCCGCCGCCTGGTCACGCAGGTCTATCCGGCCGGTATCGTGT 29539 Query 144103 CAGTATCGTTTCTGATGCATGGGATTACTGGCAGGT 144138 | | | || || || | ||||| | |||||| || Sbjct 29538 CGG--TGGTGTCCGACACCTGGGACTTCTGGCAAGT 29505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511792022078040