Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_022972.2 Length=37372 Score E Sequences producing significant alignments: (Bits) Value seq5 136 9e-28 >seq5 Length=148305 Score = 136 bits (150), Expect = 9e-28 Identities = 253/371 (68%), Gaps = 9/371 (2%) Strand=Plus/Minus Query 34821 GCTATGGGTTCACACCAGTCGGCCCGCGCTAAGACAACAACCTGGCTAACCCCGCCGCAT 34880 || ||||| | |||||||| || ||||| | ||||| || ||||| || ||||| | Sbjct 29283 GCAATGGGCGCGCACCAGTCAGCGCGCGCCGACACAACGACATGGCTCACGCCGCCCGAC 29224 Query 34881 GTGTTCCAAACCTTGGGAGAGTTTGACCTGGACCCCTGCGCAGCCCC-TGG--------G 34931 | || | | |||| ||| || || ||||| ||||| || || | | | Sbjct 29223 ATCATCGAGAAACTGGGTCCGTTCGATCTCGACCCGTGCGCCGCTCCGTCGCCGCGCCCG 29164 Query 34932 TGGCCAACCGCAAAGCGACACATCATCCTGCCCGATGACGGCTTTACTGCTGAGTGGAAA 34991 ||||| ||||| ||| || ||| || ||||| |||||| | |||| || |||| Sbjct 29163 TGGCCGACCGCGGGGCGGCATATCGAGCTTCCCGAGGACGGCCTCGCTGCCGACTGGACG 29104 Query 34992 GGCCGCGTCTGGCTCAACCCTCCGTATGGCCAGGAGTCCTGGCCGTGGCTTGCGAAACTT 35051 || | || |||||||| || ||||| || | | ||| |||||| | || || Sbjct 29103 GGTCATGTGTGGCTCAATCCGCCGTACAGCTTCGCCGCGTGGAAGTGGCTAGACAAGCTC 29044 Query 35052 GCAGCCCACGGCGAGGGAACTGCTCTCATCTTCGCTCGAACCGAAACAGCCGGCTTCGTG 35111 || || ||||| || || | || ||||||||||| || || || || || |||||||| Sbjct 29043 GCGGCGCACGGTGATGGCATCGCGCTCATCTTCGCACGCACGGAGACGGCGGGCTTCGTC 28984 Query 35112 GAAGAGGTCTGGGGTAAAGCGACAGCGGTCAAGTTTCTTCACGGGCGCCTGTTCTTTCAC 35171 | | |||| |||| || ||||||| || ||| ||||||||||| || | ||| ||| Sbjct 28983 GCACAGGTGTGGGAGAAGGCGACAGGTGTGCTGTTCCTTCACGGGCGGCTCTACTTCCAC 28924 Query 35172 TACCCGGACGG 35182 || ||||| Sbjct 28923 CGGCCCGACGG 28913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119457451882692