Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq706 398 4e-106 seq240 340 8e-89 seq5 109 3e-19 >seq706 Length=18769 Score = 398 bits (440), Expect = 4e-106 Identities = 576/806 (71%), Gaps = 13/806 (2%) Strand=Plus/Plus Query 64668 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 64727 || || ||||| |||||||| || ||||| || |||| ||| || ||| |||| || Sbjct 13747 GTCGAAGTCATCCCCACCGGTTCCATCGCCCTCGACGTCGCCCTCGGCGTCGGTGGTCTT 13806 Query 64728 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 64787 || | ||||| | | || |||||||| || || || || || ||| | || ||| Sbjct 13807 CCTCGCGGCCGCATCATCGAGATCTACGGTCCGGAGTCGTCGGGTAAGACCACGCTGACC 13866 Query 64788 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 64847 ||||||||| | ||||| | |||| || || |||| |||||| | ||||||||| ||| Sbjct 13867 CTCCACGCGATCGCCAACGTGCAGCGCGCGGGCGGCATCGCCGCATTCATCGACGCCGAG 13926 Query 64848 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 64907 ||| | || ||||| || |||||| | |||||| || ||| ||||| | || | || Sbjct 13927 CACGCGCTCGACCCCGACTACGCCGCGAAGCTCGGCGTCGACATCGACCAGCTGCTCGTC 13986 Query 64908 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 64967 ||||| ||||| || |||||||| || ||||||| ||| | ||||| || ||| Sbjct 13987 TCGCAGCCCGACACCGGTGAGCAGGCGCTCGAGATCGCCGACATGCTCGTGCGTTCGGGC 14046 Query 64968 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 65027 | | | | |||||| | ||||| || || ||||| || || |||||| ||||| Sbjct 14047 GCAATCGACCTGGTCGTCATCGACTCGGTCGCCGCCCTCGTCCCCAAGGCCGAGATCGAA 14106 Query 65028 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 65087 ||||| || || ||| ||||| |||||||| |||||| | ||||||||||| | || Sbjct 14107 GGCGAGATGGGCGACTCGCACGTGGGCCTGCAGGCGCGCTTGATGTCGCAGGCGCTCCGG 14166 Query 65088 AAGCTCACCGG-CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCG 65146 ||||||||||| || |||| ||||| || || ||| |||||||| |||| Sbjct 14167 AAGCTCACCGGTGGCCTGAACCAG-ACCAAGACCACCGCGATCTTCATCAACCAGCTGCG 14225 Query 65147 CGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTT 65206 |||||||||||| ||| || |||| || |||||||| | ||||| ||||| | Sbjct 14226 CGAGAAGATCGG---CGTCTTCTTCGGCTCGCCCGAGACCACTGCCGGCGGGAAGGCGCT 14282 Query 65207 GAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 65266 | ||||||||| || || ||| | || |||| ||||||| || |||||| || Sbjct 14283 CAAGTTCTACGCGTCGGTACGCCTCGACATCCGCCGCATCGAGACGCTGAAGGACGGTAC 14342 Query 65267 TGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCA 65326 || || ||||| |||||||| || || |||||||||||||||||| |||| ||||| Sbjct 14343 CGACGCGGTCGGTAACCGCACTCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTT 14402 Query 65327 CCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAA--CTC 65384 | | || |||||| | || ||| ||| |||||||||||| || | ||| ||| Sbjct 14403 CAAGCAGGCGGAGTTCGACATCCTGTTCGGCACGGGCATCTCGCGCGAAG--GAAGCCTC 14460 Query 65385 CTCGACCTGGCCGTGTC--GCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 65442 ||||| | | ||||| ||| ||| | || ||||||||||| ||||||| || |||| Sbjct 14461 ATCGACTT--CGGTGTCGAGCACGGCATCGTCAAGAAGTCGGGTGCCTGGTACACCTACG 14518 Query 65443 GGGACAAGAACGTCGCCCAGGGCAAG 65468 | | || | ||| ||||||||| Sbjct 14519 ACGGCGAGCAGCTCGGTCAGGGCAAG 14544 >seq240 Length=32197 Score = 340 bits (376), Expect = 8e-89 Identities = 550/789 (70%), Gaps = 9/789 (1%) Strand=Plus/Plus Query 64683 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 64742 |||||||| | | ||||||| ||| |||||| |||| || ||| | ||||| ||| Sbjct 30985 ACCGGCTCGCTGGGTCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCGTG 31044 Query 64743 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 64802 |||||||||||||| || ||||| || || ||| | || ||| || || | ||||| Sbjct 31045 GTGGAAATCTACGGTCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGTCGTGGCT 31104 Query 64803 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCT 64862 | ||| ||| ||| |||| | ||||| | ||||||| || ||| | |||||| Sbjct 31105 GAAATGCAAAAGATCGGCGGCACCTGCGCCTTCGTCGACGCCGAACACGCGCTGGACGTG 31164 Query 64863 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACT 64922 |||||||| | ||| || || |||| | | |||| || | ||||||||||| Sbjct 31165 CAGTACGCCTCGAAGCTGGGCGTCAACCTGGCCGACCTGCTGATCTCGCAGCCGGACACG 31224 Query 64923 GGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTC 64982 || |||||||| ||||| ||| ||| || || || || | | | | || Sbjct 31225 GGTGAGCAGGCGCTGGAAATCACCGACGCGCTGGTGCGCTCGGGTTCGGTCGACCTGATC 31284 Query 64983 GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGAC 65042 || || ||||| || |||||||||||||| ||||| |||||||||| || || || Sbjct 31285 GTGGTCGACTCGGTCGCGGCCCTGGTGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGAT 31344 Query 65043 AGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACC 65102 | ||||||||| || ||||| ||| ||||| |||||||||| |||| |||| Sbjct 31345 TCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCACC 31404 Query 65103 ATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGC--- 65159 ||| | |||||| || ||| |||||||| | ||| |||||||||| Sbjct 31405 ATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTG 31464 Query 65160 AACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCC 65219 | | ||| || |||||| |||||||| |||||||| || | | |||||||||| Sbjct 31465 ATGTTCGGCAAC--CCCGAA----ACCACCACCGGCGGCAACGCGCTCAAGTTCTACGCC 31518 Query 65220 TCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGC 65279 || || ||| |||| |||| ||||||| | | ||| | ||||| |||| |||||| Sbjct 31519 TCGGTGCGCCTGGACATCCGCCGCATCGGCTCGATCAAGAAGGGCGACGAGGTCGTCGGC 31578 Query 65280 AACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAG 65339 ||| ||||| || ||||| |||||||||||| | || || ||| | | |||||| Sbjct 31579 AACGAAACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCGCCCCCGTTCAAGCAGGCCGAG 31638 Query 65340 TTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTG 65399 ||| | || ||||||| | ||||||||||| || | |||| || ||||||||| |||| Sbjct 31639 TTCGACATCATGTACGGCGCCGGCATCTCGCGCGAAGGCGAAATCATCGACCTGGGCGTG 31698 Query 65400 TCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCC 65459 | | ||||| | ||||| ||||| |||| || ||| | ||| | ||| | Sbjct 31699 GCCGCCAACGTGGTGGACAAGTCCGGCGCGTGGTACAGCTACAACGGCAACCGCATCGGC 31758 Query 65460 CAGGGCAAG 65468 ||||||||| Sbjct 31759 CAGGGCAAG 31767 >seq5 Length=148305 Score = 109 bits (120), Expect = 3e-19 Identities = 212/304 (70%), Gaps = 13/304 (4%) Strand=Plus/Minus Query 58924 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 58983 |||| |||| ||| || ||||||||||||||||||| ||| || |||| | |||||| Sbjct 31288 TCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAGAACGGGCTGCCCGTCG 31229 Query 58984 CCAACTTCACCGTCGTGTCCAACGAACGCCGC-CG--CGACGCCCAGGGCAAC---TGGG 59037 | ||||||||| ||| ||| | | | |||| || |||| |||| ||| ||| Sbjct 31228 CGAACTTCACCATCGCGTCGACC---CCCCGCACGTTCGACCGTCAGGCGAACGAGTGGA 31172 Query 59038 TCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGG 59097 |||||||| ||| ||||| || | ||||||| || ||||||| |||||| Sbjct 31171 AGGACGGCGAGGCCCTGTTCCTGCGGGCGTCGGTCTGGCGTGAGTTCGCCGAGCACGTGG 31112 Query 59098 CGGAAAGCCTCCAGAAAGGCCAG-CGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCC 59156 ||| || | |||| ||| || ||||||| | || || ||||||||| Sbjct 31111 CGGGTTCGCT-GACCAAGGGCAGCCGTGTCATCGCGACCGGTCGTCTGCGTCAGCGCTCC 31053 Query 59157 TTCGA-GACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGG 59215 | | | |||| | |||| | | ||||||| |||||| | ||||| ||||||||||| Sbjct 31052 TACCAGGACCGTGACGGGC-AGACCCGCACCGCCATCGAACTCGAGGTGGACGAGATCGG 30994 Query 59216 CCCG 59219 |||| Sbjct 30993 CCCG 30990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237324061540669