Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_023502.1 Length=109558 Score E Sequences producing significant alignments: (Bits) Value seq313 91.5 1e-13 >seq313 Length=28640 Score = 91.5 bits (100), Expect = 1e-13 Identities = 198/291 (68%), Gaps = 24/291 (8%) Strand=Plus/Plus Query 31238 TGGAACGGCACGTTCAAGTGGGCCTGGACGGATAACCCGGCGTGGGTGCTCTACGACATC 31297 ||| ||||||| |||||| ||||||||| | |||||||| |||||| |||||||| || Sbjct 19596 TGGGACGGCACCTTCAAGCTGGCCTGGACCAACAACCCGGCCTGGGTGTTCTACGACCTC 19655 Query 31298 ATGACCAATGATCGCTTCGGTCTTGGCGAGGATATCGACGCCTCGCAGG-TGGACAAGTG 31356 || | ||| || |||| || || ||| | | | || | || || |||||||||| Sbjct 19656 ATCAGCAACGACCGCTATGGCCTGGGCACGCGCGT-GCCGGCGGGCTGGCTGGACAAGTG 19714 Query 31357 GTCGCTCTACGAGATCG--CGCAATACGCAGACCAGAACGTGCCCGATGGCCGTGGCGGC 31414 | || ||| |||||| ||| || || ||| ||| || || ||| ||||| Sbjct 19715 GGGCCTGTACCAGATCGGCCGCTATT-GC-GACGAGATGGTCGATGACGGCTTCGGCGGA 19772 Query 31415 AACAAGCCGCGCTTCACGTTCAACGGCGCGATGTACGATCAGCAGGAGGCATTCGACGCC 31474 || | ||||||||||| | ||||| | ||| || |||| ||| ||||||| Sbjct 19773 AAGGAACCGCGCTTCACCTGCAACG------TCTACCTGCAACAGGCGGC---CGACGCC 19823 Query 31475 ---------ATCCAGCAAATCGCTTCCGTGTTCCGTGGCATGGCCTATTGG 31516 | ||| | |||| ||| | ||||| |||||||| |||||| Sbjct 19824 TACCGGGTGGTGCAGGACTTCGCCTCCATTTTCCGCGGCATGGCTTATTGG 19874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350426634343241