Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq75 239 1e-58 seq27 111 5e-20 seq424 107 6e-19 seq1581 96.9 1e-15 >seq75 Length=46716 Score = 239 bits (264), Expect = 1e-58 Identities = 503/739 (68%), Gaps = 27/739 (4%) Strand=Plus/Plus Query 32079 TCGGCGGCAGCCTTTGCCTCGGTTTCGCGGCGAGCGGCGGCTTCGCGTTCTTCCTGGGCG 32138 ||||| || ||| ||||||| ||||||||| |||||||| ||||| || |||||||| Sbjct 104 TCGGCAGCGGCCAGGGCCTCGGCTTCGCGGCGGGCGGCGGCGTCGCGCTCGGCCTGGGCG 163 Query 32139 CGTCGTTCCGCTGCAAGGCGCTCGGC---CTCGGCTGCTTCGCGGGCAATGCGCTCCTCG 32195 || || ||| | ||||| ||| |||||| ||||||||||| |||||||| || Sbjct 164 CGGGTCTCTGCTTC---GCGCTGGGCGCGCTCGGCCGCTTCGCGGGCGATGCGCTCTTCA 220 Query 32196 CGCTCTTTCTGCTCGCGTGCTGCTGCTTCGGCGCGCAGGCGTTCCAGTTCGGCCTGCTCG 32255 || || ||||| |||| | ||| | |||| |||||||| ||||||||||||||||| Sbjct 221 CGTTCCTTCTGTGCGCGCTCGGCTTCAGCGGCACGCAGGCGCGCCAGTTCGGCCTGCTCG 280 Query 32256 GCTTCGAACTTCTCACGGGCAACCAGGGCTT--CTCGGAGAGCGAT-CAAAGCCTTATCT 32312 || ||| ||||||| || || ||||||||| || | || || | || | Sbjct 281 GCGTCGTACTTCTCGCGCGCCGCCAGGGCTTGCGTCAGGGA---ATCCTGGGCGCGGGCC 337 Query 32313 TTGGCGCGAGCAGCCTCTGCCTCGAACTCTTCCCAGGCTTCACTTATGGCCAGGCCTTCC 32372 ||| |||| ||||| |||||| | || ||||||| || | ||| || | | | Sbjct 338 TTGACGCGGTGCGCCTCGGCCTCGTATTCCTCCCAGGACGCATCCACGGCGCGGGCATTC 397 Query 32373 AACCAAGCGATGTTGGCTTTGAGTTCATTAGAGTCCAGATCGCGGCATTC--CAG-GCGA 32429 | | ||||| | || || || | | ||||| |||||| || | | ||| Sbjct 398 ACCTCTTCGATGGTCGCGCGCAGCTCGGTCGCATCCAGGTCGCGGTGCTCGTCGGCGCGC 457 Query 32430 AGGTTTATCTTATCGATCTCGCCCTGAT-GACGCGCAACCCGC--GCCGCTTCAGCCTCT 32486 ||| | | |||| | ||||| | | |||| | ||| || | || || || Sbjct 458 AGGCGGAACCACTCGA---CACCCTGCTGGTGGCGCTGCTCGCGTGCTTCCTCGGCGGCT 514 Query 32487 TCCCACTCGGTCAACGGACTGCGCA---CTTCGGCCTGCCAGGAATCCAACAGGTCGCGC 32543 ||||| |||||| ||| ||||| |||||||| || | |||| ||||||| Sbjct 515 TCCCATGCGGTCAGCGGCGCGCGCACCTCTTCGGCCAGC---GCGTCCAGGGTGTCGCGC 571 Query 32544 ATCCGCTTACGCTCGGCATCGATCTTCTTCGGAACTTCCTTCAGCTCAGCGACCAATTCC 32603 || ||||| ||||| || ||||| ||| || || ||||| || || |||||| | | Sbjct 572 ATGCGCTTGCGCTCCGCGTCGATGCGCTTGGGGACGTCCTTGAGTTCGTCGACCAGCTGC 631 Query 32604 TTGCCCACGTTGTCCAGCGCCGTCTTGGAGCGGGCGACCTTGTAGGCGATGGAAGCGATG 32663 ||||||| | ||||||||| ||||| || | ||||||| | || | | ||| || Sbjct 632 TTGCCCAGGGCGTCCAGCGCGGTCTTCGATTTGCGGACCTTGAACGCCAGGCTGGCGGTG 691 Query 32664 GCATCGCGGCCCTTGCGGGTTGAAACGTCCGGCACGAAGCCGTCGATTTCCTCGCGAATC 32723 || || ||||| || ||| || | ||| |||||| |||| | ||| |||| ||| Sbjct 692 GCCTCACGGCCTTTCTTGGTCGACATGTCAGGCACGTGGCCGGACACTTCGGCGCGGATC 751 Query 32724 TTGGCCAGGAACGGGTCAAGGCCATTGGCTGCCGAGTAGACTTGCAGAGCGGTTTCTTTG 32783 |||||||| | || || ||||| ||| || || || | ||| |||||||| | | Sbjct 752 TTGGCCAGCCAGGGCTCCAGGCCGCTGGGCTTGGAATACACCTCCAGCGCGGTTTCCTGG 811 Query 32784 GCTGGTACTTCGACCAGTT 32802 | || | |||| | |||| Sbjct 812 GGCGGCAGTTCGGCGAGTT 830 >seq27 Length=64058 Score = 111 bits (122), Expect = 5e-20 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 5372 CAACACATCGATCTGGCTGATTGGCTGGGGCGAGAACACCGTCCACGGCATCTATCCGAA 5431 |||||| ||| ||||| || | | |||||| ||||||||| |||||||||| || || Sbjct 17527 CAACACGTCGGTCTGGTTGGTGGTGTGGGGCAAGAACACCGCGCACGGCATCTTCCCCAA 17586 Query 5432 GGGTTCGCAAGCCGGCCTGGTCCACAAGGATCTTGGTGAAGGCGACGCTTTCGATGCCAG 5491 ||| || | ||||||||| ||||| |||| | ||| |||||| ||||| ||| Sbjct 17587 GGGCTCCAAGGCCGGCCTGATCCACGAGGACATGGGTCTGATCGACGCGTTCGACTCCAA 17646 Query 5492 CGGCAACCGCTTCCGTGCCCTGATGGACCAATACCAGTGGAAGGCCGGCATTGCGGTCAA 5551 | |||||||||||| ||| ||||| | || ||||| | ||| | || | Sbjct 17647 CAACAACCGCTTCCGCGCCTACGCCGACCACTGGCAATGGAAATCAGGCCTGACGTTGCG 17706 Query 5552 GGACTGGCGTTACATCGTTCGCATCGCGAACATCGATGTCACCACCCTG 5600 |||||||| ||| | || || ||||||||| | || ||| | |||| Sbjct 17707 CGACTGGCGCTACGTGGTGCGTATCGCGAACGTGGACATCAGCGACCTG 17755 >seq424 Length=24479 Score = 107 bits (118), Expect = 6e-19 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 31752 CCTCAATAGTTGATCGTGATGTGAGGAACCTTGCGCTGAGCGATCAGGGTGATCGCCTGC 31811 ||||||||| |||| ||||| || | || || |||||||| |||| ||||||| Sbjct 24224 CCTCAATAGGTGATACGGATGTTGGGGATGGCGCCCTTGGCGATCAGCGTGACCGCCTGC 24283 Query 31812 TTGGCGCATTCCTCGGGCATGCCGCCGGCGATCAGGGCCGCCAGGGCTTCGTTGTTGATG 31871 |||||||| ||||||||||||||| | || | ||| ||||||| | ||||||| Sbjct 24284 TTGGCGCAGTCCTCGGGCATGCCGGCCAGGACAAAGGCATCCAGGGCGGTGCGGTTGATG 24343 Query 31872 GCTTTCTTGTGGGCCTTGTCGGCTTCTCGGGCTGCTGCCTCGCGCT-CGATCCTGGCTTG 31930 | |||||| ||||||||||| || ||| || | ||| ||| | | ||| || Sbjct 24344 CTTGCCTTGTGCGCCTTGTCGGCCTCGCGGCGCGCGGTTTCG-GCTGCCGCCGCGGCCTG 24402 Query 31931 CTCGTCTGCCTGCCGTTGGCGCTCTGCGGCAGCGGC 31966 |||||| || || ||||| || ||||| ||||| Sbjct 24403 CTCGTCGGCAATGCGCTGGCGTTCGGCGGCGGCGGC 24438 >seq1581 Length=10720 Score = 96.9 bits (106), Expect = 1e-15 Identities = 220/332 (66%), Gaps = 12/332 (4%) Strand=Plus/Minus Query 30056 CCGCCAAACATCTGCATCTGCCCGTGCATGTCGACGATGATCTCTGTTGTGTAGCGGTCC 30115 ||||| | |||||||||||| |||| ||| ||| || || |||||||||| Sbjct 10618 CCGCCCAGCATCTGCATCTG---------GTCGGCGACGATTTCGGTGCTGTAGCGGTCA 10568 Query 30116 TGACCG---TCCTGCGCCTGCCACTTTCGAGTTCTGAGTGAACCCTCGACGTACAGTTGC 30172 ||| |||| | |||||||| || || | || ||||||| ||| | Sbjct 10567 GCGCCGGTGTCCTTGTCTTGCCACTTGCGGGTCTTCAGGCGGCCCTCGATGTAGACCGAG 10508 Query 30173 TGACCCTTCTTTACGTGCTGCCCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCGG 30232 | |||||||| | || | ||| |||| || |||| | | | ||||||||| Sbjct 10507 CGGCCCTTCTTCAGGTATTCGCCGGCGATTTCGGCCAGGCGGTTGTACATGACCACGCGG 10448 Query 30233 TGCCATTCGGTGCGCTCCTGTTGCTGGCCGGTCTGCTTGTCCTTCCAGCTCTCGCTGGTG 30292 ||||||||||| || | | | ||| | ||||||||||||| | | | ||| Sbjct 10447 TGCCATTCGGTTTCTTCGCGGCGTTCGCCCGATGCCTTGTCCTTCCAGGTGGAGGTCGTG 10388 Query 30293 GCGAGGGTGATGTTGGTCACCGCATTGCCGTTGGGCATATAGCGAGTTTCCGGGTCACCA 30352 |||| || |||||| | || |||| ||| | ||||| ||||||||| | | Sbjct 10387 GCGATGGACATGTTGCAGATTGCGGCCCCGTCGGGGCTGTAGCGGACTTCCGGGTCGCGA 10328 Query 30353 CCGACGTTGCCAACCAGAATGACTTTGTTAAC 30384 || | |||||| || ||||||||||||||||| Sbjct 10327 CCCAGGTTGCCCACGAGAATGACTTTGTTAAC 10296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145624566081456