Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_023690.1 Length=110569 Score E Sequences producing significant alignments: (Bits) Value seq706 140 2e-28 seq332 116 3e-21 seq6499 96.9 2e-15 >seq706 Length=18769 Score = 140 bits (154), Expect = 2e-28 Identities = 214/302 (71%), Gaps = 11/302 (4%) Strand=Plus/Minus Query 97011 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97070 |||||||| |||||||| | |||||| ||| ||| ||||| | ||||| || || Sbjct 11039 CGCCCCCATCGGCAGGAACAGCCCGTCGCCCTGTCCGATGAGACGGTCGGCGCCCGGCTG 10980 Query 97071 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCT-GTG---GCGAACGAGAGCCTAGACG 97126 ||| ||||| || || ||||||| ||| ||| ||||||| ||||| || | Sbjct 10979 GTCGAGGATGACGCGCGAGTCGGTGAC----GCTCGTGACCGCGAACGCGAGCCGCGAGG 10924 Query 97127 GCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGA 97186 ||||||||| ||||| || || ||||| || || ||| || ||||| || || || | Sbjct 10923 GCACGTTGGCCTTGATGAGACCCGTGACGACGTCGACGCTCGGACGCTGGGTGGCGAGCA 10864 Query 97187 CGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTT 97246 ||||||| || ||| || || || ||| | |||||| || || | ||||||| | Sbjct 10863 CGAGATGGATGCCGCTGGCCCGGGCGAGCTGCGTGATGCGAACGATCGAGTCCTCGACGT 10804 Query 97247 CTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGG 97306 | | | || ||||||||||||| ||||| |||||||| || |||| | ||||| Sbjct 10803 CGCGCGGGG---CGACCATCATGAGGTCGGCGAGCTCGTCGACGACGACCAGCAGGTAGG 10747 Query 97307 GG 97308 || Sbjct 10746 GG 10745 >seq332 Length=27903 Score = 116 bits (128), Expect = 3e-21 Identities = 141/188 (75%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 97125 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 97184 ||| | ||||| ||||| ||||| |||| || || ||| ||| |||||||||||||| Sbjct 24708 CGGGATGTTGGCCTTGATCAGGCCGGTGATGACGTCGACGCTGGGACGCTGCGTCGCCAG 24767 Query 97185 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCG 97242 || || ||||| ||||| |||||||||||||| || | |||| | || ||| | ||| Sbjct 24768 GATCAGGTGAATGCCGGCCGCGCGCGCCTTCTGCGCCAGGCGGGCGATCAGTT--CTTCG 24825 Query 97243 ACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATG 97302 | || |||||| | ||||||| ||||| || || ||||||| || ||||||||| Sbjct 24826 A--TC-TTCTTGCCCACCACCATCATCAGGTCGGCCAGCTCGTCGATGACCACCACGATG 24882 Query 97303 TAGGGGAG 97310 ||| || Sbjct 24883 GTGGGCAG 24890 >seq6499 Length=1589 Score = 96.9 bits (106), Expect = 2e-15 Identities = 181/263 (69%), Gaps = 15/263 (6%) Strand=Plus/Minus Query 97051 AGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATG----CTGT 97106 |||||||||||||| |||| |||||| ||||| ||| | || | ||| Sbjct 1162 AGCTGCTCGGCTCCCTGCTCGCTCAGGATGGTGCGGCTGTCGATCTTCGACGTCACCTG- 1104 Query 97107 GGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGA 97166 ||| |||| | | ||| | ||||| ||||| ||| |||| || ||||| || Sbjct 1103 ---GAAGGAGATGCGGGTCGGGAAGTTGGCCTTGATCGTGCCGGTGATCACGTCCACCGA 1047 Query 97167 GGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCG 97226 || ||||||||||||| || || || || ||||| ||||||||| |||| || | ||| Sbjct 1046 CGGGCGCTGCGTCGCCATGATCAGGTGGATGCCGGCGGCGCGCGCCATCTGCGCCAGGCG 987 Query 97227 GACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGC--CCATCATGAGGTCTGCGAGTTCG 97284 || |||||| || |||| |||| ||||||| ||||| || | ||| Sbjct 986 CTGGATCGCCCCCTCGATGTC---CTTG--CCCGCCACCATCATCAGGTCGGCCATCTCG 932 Query 97285 TCGACCACTACCACGATGTAGGG 97307 ||||| | |||||||||||||| Sbjct 931 TCGACGATCACCACGATGTAGGG 909 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 97399 ACCGCCT-CGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGG 97457 ||||||| | ||||| ||||| |||||||| | || |||||||| |||| || Sbjct 700 ACCGCCTTCTTCGGG-TCGGTCACCACCGGGGCGAGGAGATGGGGGATGCCGTCATAGAT 642 Query 97458 GGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGTTTGACCCGATCAGGATTGGCTCG 97517 || ||| |||| |||||| || |||| |||||| || | | || || || || Sbjct 641 GGAGAGCTCCAGCATCTTGGGATCGACCATGATCAGCCGGCACTCCTCGGGCTTCAGCCG 582 Query 97518 GTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGCC 97577 |||||||| || | | ||| | |||||| ||||| || || ||||||| ||| Sbjct 581 GTAGAGCAGCGACAGGATCATGGTGTTGATCGCCACCGACTTGCCCGAGCCGGTGGTGCC 522 Query 97578 AGCCACCAGCAGGTGCGGCATTTT 97601 ||||| |||||||||||||| || Sbjct 521 GGCCACGAGCAGGTGCGGCATCTT 498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353661518950670