Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_023725.1 Length=156646 Score E Sequences producing significant alignments: (Bits) Value seq688 93.3 4e-14 seq199 82.4 8e-11 >seq688 Length=19146 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 115941 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 116000 || |||||||| || |||| || ||||| ||| | |||| | ||| |||||||| Sbjct 4307 GGTCCGGGCCGCGGGTCCGGCGCGGGCTCCATGGCCGCCTATGCGATGCGCATCACCGAC 4366 Query 116001 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGCCCCGAC 116060 |||||||| | || ||| ||||| |||||||| || ||||||| ||||| | | Sbjct 4367 CTCGACCCGCTGCAGCACGGTCTGATCTTCGAGCGGTTCCTCAACCCCGACCGTGTCTCC 4426 Query 116061 TTCCCCGACATCGACGTCGACTTC 116084 | |||||| |||||||||||||| Sbjct 4427 ATGCCCGACTTCGACGTCGACTTC 4450 >seq199 Length=34335 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 99193 ACGGGCCGGTATCTTAGTCTGGTCAAAGAAGCGGACTTTTAATCCGCGCGCCGTGGGTTC 99252 ||||||| ||| || |||| | || || | ||||||||||||||||| | ||||||||| Sbjct 14178 ACGGGCCTGTAGCTCAGTCGG--CAGAGCATCGGACTTTTAATCCGCGGGTCGTGGGTTC 14121 Query 99253 GAATCCCACCCGGCCCACCCTC 99274 || |||||| ||||||||||| Sbjct 14120 GAGCCCCACCGGGCCCACCCTC 14099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501089092344240