Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq7728 159 3e-34 seq73 96.9 3e-15 seq1176 95.1 1e-14 seq907 93.3 4e-14 seq1162 91.5 1e-13 seq12 91.5 1e-13 >seq7728 Length=1087 Score = 159 bits (176), Expect = 3e-34 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| || | |||| |||||| |||||||||||| Sbjct 244 GTGGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCCAGCTGCTTGCCC 185 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||| |||||||| || || ||||| ||||||||||| |||||||||||| Sbjct 184 GCAAAGATGAGGCGCTGCTGATCAGGGGGGATCCCTTCCTTGTCCTGGATCTTTTGCTTC 125 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | |||||| ||||||| || || | ||||| ||| ||||| ||||| || Sbjct 124 ACATTCTCGATTGTGTCGCTGGGCTCAACATCTAGGGTGATGGTCTTGCCCGTCAGGGTC 65 Query 133644 TTTACGAAAATCTGCATGGCT 133664 || ||||| |||||||||||| Sbjct 64 TTGACGAAGATCTGCATGGCT 44 >seq73 Length=47289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/105 (82%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || |||| ||| ||| ||| | | | ||||| ||||||||||| Sbjct 32430 GTGGACTCTTTCTGGATGCTGTAGTCGGCCAGGGTGCGGCCA-TCCTCAAGCTGCTTGCC 32488 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 || | | || | ||||||||||||||||||||||| |||||||| Sbjct 32489 CGTGAAGATTAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC 32533 >seq1176 Length=13603 Score = 95.1 bits (104), Expect = 1e-14 Identities = 86/106 (81%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || ||| ||| | | | ||||| |||||||||| Sbjct 12524 GGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCA-TCCTCCAGCTGCTTGC 12582 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||| |||| || ||||||||||| ||||| ||||| |||||||| Sbjct 12583 CCGCAAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTC 12628 Score = 95.1 bits (104), Expect = 1e-14 Identities = 86/106 (81%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || ||| ||| | | | ||||| |||||||||| Sbjct 13283 GGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCA-TCCTCCAGCTGCTTGC 13341 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||| |||| || ||||||||||| || |||||||| |||||||| Sbjct 13342 CCGCAAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 13387 >seq907 Length=16333 Score = 93.3 bits (102), Expect = 4e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 |||||| |||||||| ||||||||||||||||| || || |||||||| || || Sbjct 11364 CAGGCAGGCAAAGTCTGTGTGCAGGCCCTCGTCCCGACTGATGAGCTCGTTTGAGAAAGT 11305 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 ||||||||||||| || | |||||| |||| |||| | ||| || || || Sbjct 11304 GAGGCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGACCCGGAGAA 11245 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAAC 120804 ||| | ||||||||| ||||| || | || ||||| || ||| Sbjct 11244 GAAGATGCCCTCCACACACGCAAACGCAATCAGACGCTCCGCAAAC 11199 >seq1162 Length=13745 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| || || || ||||| || ||| ||| | ||||| ||||||||||| Sbjct 13635 GGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTCAAGCTGCTTGCC 13694 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||| | || || ||||||||||||||||| ||||| |||||||| Sbjct 13695 CGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 13739 >seq12 Length=84225 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||| || || || ||||| || ||| ||| | ||||| ||| Sbjct 67 AAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTCAAGC 126 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||||||||||| | || || ||||||||||||||||| ||||| |||||||| Sbjct 127 TGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483372463962760