Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq873 150 3e-30 seq907 96.9 5e-14 seq7177 91.5 2e-12 seq235 91.5 2e-12 seq713 86.0 9e-11 >seq873 Length=16725 Score = 150 bits (166), Expect = 3e-30 Identities = 225/312 (72%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 2133600 TGCGAGCACCACCTGCTGCCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCCGCGGGC 2133659 || ||||||||| |||||||||| ||||||||||| || |||| |||||||||| ||| Sbjct 3643 TGTGAGCACCACATGCTGCCCTTCATCGGCAAGGCGCATGTGGCCTACCTGCCCAACGGC 3584 Query 2133660 AAGATCATCGGTCTGAGCAAGATCCCGCGCATCGTCGACATGTTTTCCGACCGCTTCCAA 2133719 ||| | | || ||| |||| | | ||||||||||| |||| || |||| | || Sbjct 3583 AAGGTGCTGGGCCTGTCCAAGGTGGCCCGCATCGTCGAGATGTACGCCCGCCGCCTGCAG 3524 Query 2133720 GTACAGGAGGCACTCACGCGCCAGATCGCCGAGAGCGTG-AGCCAGGTTACGGGCGCGCG 2133778 | ||||| |||| |||||| | |||||| ||| || | ||| || ||||| Sbjct 3523 ATCCAGGAAAACCTCAGCCGCCAGGTGGCCGAGGCGGTGCAGTC-GGTCACCGGCGCCGC 3465 Query 2133779 CGGCGTCGGCGTCGTCCTCGAGGGCCTGCACATGTGCGTGTGTATGCGCGGCGTGCGCAA 2133838 |||||| | ||| ||| |||||| || |||||||||| || ||||||||||| || || Sbjct 3464 CGGCGTGGCCGTGGTCATCGAGGCCCAGCACATGTGCATGATGATGCGCGGCGT-CGAAA 3406 Query 2133839 AAC-GGGCTCGAACACGGTCACGCGCGTCCTCCTGGGCGCCATGCACGACGATCCCGTGG 2133897 | | | ||| || |||||| ||| | ||||||| | |||||| | ||||| | Sbjct 3405 AGCAGAATTCGTCCATGGTCACCTCCGTGATGCTGGGCGAGTTCCACGAC-AACCCGTCG 3347 Query 2133898 ---CGCGCCAAG 2133906 |||||| || Sbjct 3346 ACCCGCGCCGAG 3335 >seq907 Length=16333 Score = 96.9 bits (106), Expect = 5e-14 Identities = 107/139 (77%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 1456173 TTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTC 1456231 ||||| ||||| || | | ||||| | || ||||||||||| ||||| || ||| Sbjct 11200 TTTGCGGAGCGTCTGATTGCGTTTGCGTGTGTGGAGGGCATCTTCTTCTCCGGGTCCTTC 11259 Query 1456232 TGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGC-AACG 1456290 ||| ||||||| ||||||||||||||||| ||||||||||| || |||| | |||| Sbjct 11260 TGCTCCATCTTCTGGCTCAAGAAGCGCGGACTCATGCCCGGCCT--CACTTTCTCAAACG 11317 Query 1456291 AATTTATCAGTCGCGACGA 1456309 | | |||||||| ||||| Sbjct 11318 AGCTCATCAGTCGGGACGA 11336 >seq7177 Length=1288 Score = 91.5 bits (100), Expect = 2e-12 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 260006 GGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGT 260065 |||||||||||||| || ||| | ||||| |||||||||| | || ||||||||||| Sbjct 1090 GGCATCTATGACACACTTAAGGAATGCGCCTGCATCTCCAAGTCTGCTGGCGGCATCGGC 1149 Query 260066 TTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCC 260125 | || ||||| | |||||| | ||| | ||| | ||||| |||||| | Sbjct 1150 CTGTCCATGCACAATATTCGCGCCACCGGCTCGTACATTCGCGGCACAAACGGCACTAGC 1209 Query 260126 AACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACAC 260163 |||||| | ||||| ||||| ||||| || || || || Sbjct 1210 AACGGCATCGTGCCAATGCTGCGCGTGTTCAATGATAC 1247 >seq235 Length=32497 Score = 91.5 bits (100), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| ||| |||||||||||||| ||||| |||| |||| ||| ||||||| Sbjct 25936 ATCTTCAAAGTGCTCAAGCAGGTTCACCCTGACACCGG-----CATC-TCCTCCAAGTCC 25883 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| | ||| | ||||| || || |||| | | || || | | ||| || | Sbjct 25882 ATGGCCATCCTCAACTCCTTCATCGCCGACCAGTTTGAGAAGATTGCCTCCGCCGCTGCC 25823 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 | ||| ||| |||||| ||| | | |||||||| ||||||||||| Sbjct 25822 CAGCTGAGCCGCGTGAACAAGAAGCCCACCCTGACTTCCCGCGAGATTCAGACCGCCGTC 25763 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| |||||| ||||||| |||||||||| ||||||||||| Sbjct 25762 CGCCTGGTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCAGCGAGGGCACCA 25711 >seq713 Length=18696 Score = 86.0 bits (94), Expect = 9e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || ||||||||| | ||||| || |||| |||||||| || || ||||||||||| ||| Sbjct 4722 GCGGACCTGGTCTCCTGGGGGGCGATCGGCGCGCGCACGACGGAAAGCCAGGTGCATCGC 4663 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTG 165869 ||| |||| || | ||| || || | || ||||| || |||| ||||||| |||| Sbjct 4662 GAGCTGGCATCCGGCCTGTCGTGTCCGGTGGGTTTCAAGAATGGCACGGACGGCAACGTG 4603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177039681747838