Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq7728 116 3e-21 seq12 105 6e-18 seq1162 104 2e-17 seq1176 100 3e-16 seq1233 86.0 6e-12 seq585 84.2 2e-11 >seq7728 Length=1087 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | || || |||| ||||||||||| |||||||| Sbjct 239 CTCCTTCTGAATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAA 180 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | || | | ||||||||| |||||||||||||| | | Sbjct 179 GATGAGGCGCTGCTGATCAGGGGGGATCCCTTCCTTGTCCTGGATCTTTTGCTTCACATT 120 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || || || | ||||| || || ||||||| || || || Sbjct 119 CTCGATTGTGTCGCTGGGCTCAACATCTAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 60 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 59 GAAGATCTGCAT 48 >seq12 Length=84225 Score = 105 bits (116), Expect = 6e-18 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || ||||||||| |||||||| || |||| ||| ||| | || || Sbjct 63 CACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTC 122 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||||||| |||||||| |||| ||||||||||| | ||||| || |||||||||| Sbjct 123 AAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 180 >seq1162 Length=13745 Score = 104 bits (114), Expect = 2e-17 Identities = 83/100 (83%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || |||| ||| ||| | || || |||||||| |||||||| Sbjct 13641 CTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTCAAGCTGCTTGCCCGCAAA 13700 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||| ||||||||||| | ||||| || |||||||||| Sbjct 13701 GATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 13740 >seq1176 Length=13603 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 || || ||||| | | || ||||| || | || |||||| || |||||||| || Sbjct 12492 TTGCCGCCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 12551 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 |||| ||| || | || ||||||||||| |||||||| |||| ||||||||||| | | Sbjct 12552 GCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGA 12611 Query 35627 GGAACGCTCTCCTTGTCC 35644 |||| || |||||||||| Sbjct 12612 GGAATGCCCTCCTTGTCC 12629 Score = 91.5 bits (100), Expect = 1e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||| ||| || | || ||||||||||| |||||||| Sbjct 13289 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAA 13348 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||| ||||||||||| | || | || |||||||||| Sbjct 13349 AATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 13388 >seq1233 Length=13172 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | || ||||| || | ||| ||| || || |||||||||||||| Sbjct 13061 CCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCTTTCTGGATGTTGTAATCGGCA 13120 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 | ||| || |||| ||||||||||| |||||||| |||| |||||||||| Sbjct 13121 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGT 13172 >seq585 Length=20866 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||| ||| || | || ||||||||||| |||||||| Sbjct 706 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAA 765 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAA 35630 |||| ||||||||||| | ||||| Sbjct 766 AATCAGGCGCTGCTGGTCAGGAGGAA 791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450748526274920