Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_026590.1 Length=90460 Score E Sequences producing significant alignments: (Bits) Value seq5 154 9e-33 >seq5 Length=148305 Score = 154 bits (170), Expect = 9e-33 Identities = 179/239 (75%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 6197 CCGCAACGTTGGTGGCGTGAGCGTCAAGACCATCGAGACTGATTTCGGTCTTTGCAACGT 6256 ||||||||| || ||||||| |||| |||| |||||||| || ||||||| |||| | Sbjct 20028 CCGCAACGTCGGCGGCGTGAACGTCCAGACGATCGAGACCGACTTCGGTCGCCTCAACAT 19969 Query 6257 GATGCTGGACCGCTATGTTCCGGACGACACTCTGCTGGTTGTTTCGCTGGAGGAG-TGCA 6315 |||||||||||| | | ||| | ||| |||| | | || ||||||||| || | || Sbjct 19968 CATGCTGGACCGCCAGCTCCCGCAGGACGCTCTCGCGATCGTCTCGCTGGAGCAGCTTCA 19909 Query 6316 CCCCGCGTTTCCTGGAGATTCCGGGTAAGGGGCATTTCTTCGCTGAGCCGCTGGCTAAGA 6375 || | ||||| ||| | || ||||| || ||||||| |||||||| || ||| Sbjct 19908 GCC-GTTCTTCCTCGAGGTCGACGGCAAGGGCCACTTCTTCGAGGAGCCGCTCGCGAAGG 19850 Query 6376 CCGGCGCGAGCGACCGTGTTCAGCTTTACGGCGAGATCGGTCTGGAATACGGCAACGAG 6434 |||||| |||||| ||||| |||||||||||||| || || |||||||||||| Sbjct 19849 TCGGCGCTGCCGACCGCTCGCAGCTCTACGGCGAGATCGGCCTCGAGTACGGCAACGAG 19791 Score = 82.4 bits (90), Expect = 4e-11 Identities = 101/135 (75%), Gaps = 5/135 (4%) Strand=Plus/Minus Query 5499 TAAGGAGAGCCATAAATGGCTGGTATTACTGGTACGGGCACTACTTTCAACCTGCCCAAC 5558 |||||||| | ||||| | ||||| || ||| |||||| || | ||||||||||||| Sbjct 20954 TAAGGAGA---AGAAATGCCCGGTATCACCGGTCAGGGCACGACCTACAACCTGCCCAAC 20898 Query 5559 TTTGTTGGTGAACTGTATTCGGCT-TCGCCGGAGGACACCCCGTTCCTGTCCGCTATCGG 5617 || || ||||| || | | | | | | || ||| |||||| | ||||| || ||||| Sbjct 20897 TTCGTGGGTGAGCTCT-TCCAGATCACCCCCGAGTCCACCCCCCTGCTGTCGGCCATCGG 20839 Query 5618 CGGGCTGACCGGTGG 5632 ||| |||||||| || Sbjct 20838 CGGCCTGACCGGCGG 20824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 289318992174419