Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq1741 223 5e-53 seq113 114 2e-20 >seq1741 Length=9891 Score = 223 bits (246), Expect = 5e-53 Identities = 294/405 (73%), Gaps = 2/405 (0%) Strand=Plus/Plus Query 176457 ACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTTCGAT 176516 ||||| |||||||| || | ||||||||| || ||||| ||| |||||| | Sbjct 4 ACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTTAAC 63 Query 176517 TCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCAAATC 176576 | || || | ||||| || ||||| ||||| || || ||||| |||||||| ||||| Sbjct 64 CCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAAATT 123 Query 176577 TTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCCTGTC 176636 || || || || ||| || || |||||| | ||||| |||||||| ||||| || || Sbjct 124 TTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCAGTA 183 Query 176637 ATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTT-CGTGCTTA 176695 | ||||||||| | |||||| | | || | ||| |||| ||| |||||||| Sbjct 184 ACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCT-TTAAACTTACGTGCTTA 242 Query 176696 TGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTACAC 176755 |||||| || ||||| ||| | || || |||||||||||||| ||||||||||| || Sbjct 243 TGATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTATAC 302 Query 176756 AAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACCACA 176815 ||| || || ||| | |||||||| | | || |||||||| || ||||| || || Sbjct 303 AAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCA 362 Query 176816 TGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||| | |||||||||| || || ||| |||| | || ||||| Sbjct 363 TGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGC 407 >seq113 Length=41445 Score = 114 bits (126), Expect = 2e-20 Identities = 343/527 (65%), Gaps = 2/527 (0%) Strand=Plus/Plus Query 161166 AACCTGATGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAAC 161225 |||| || |||||||||||||| | ||| ||||| || || || || ||||| || | Sbjct 22881 AACCCGACGAGATCTACAACCTGGCGGCGCAGAGCCACGTCGGGGTGTCGTTCGAAGAGC 22940 Query 161226 CTGAATATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTC 161285 | || || || || | | || | ||||| ||||| | | |||| || | || Sbjct 22941 CGGAGTACACCGCCAACGCCGACGGCCTGGGCACCCTGCGCCTGCTGGAAGCCATCCGCA 23000 Query 161286 TCCTAGGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGT 161345 |||| || || | || || |||||||||| || ||| ||| |||| ||| Sbjct 23001 TCCTCAAGCTGGAGGACAAGGCGCGCTTCTACCAGGCCTCGACCTCCGAGCTGTACGGGC 23060 Query 161346 TGGTACAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCG 161405 |||| || || || || ||| |||| || || ||||| || || || || | || Sbjct 23061 TGGTGCAGGAAACGCCGCAGCGCGAAAGCACGCCGTTCTATCCCCGCAGCCCCTACGCCG 23120 Query 161406 TAGCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACG 161465 || || || || | || ||||| ||||||| | ||| || || ||| | | Sbjct 23121 CGGCCAAGCTGTACGCCTACTGGATCAGCGTGAACTACCGCGAGGCCTACGGCATGTATG 23180 Query 161466 CCAGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCC 161525 || | | || || || |||||||| || || || || || ||||| ||||| || | Sbjct 23181 CCTGCAACGGGATCCTGTTCAACCACGAATCGCCCAAGCGCGGCGAGACCTTCGTGACGC 23240 Query 161526 GTAAGATTACTAGGGGACTATCCCGTATTAGTAC-AGGACTACAGGATTGTCTATACCTA 161584 | ||||| || | || || |||| | | || | || || ||||| || || ||||| Sbjct 23241 GCAAGATCACCCGCGGCCTGGCCCGCA-TCGTGCTGGGCCTGCAGGAATGCCTGTACCTG 23299 Query 161585 GGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGG 161644 || || || | || || ||||| ||||| ||||| || || |||| Sbjct 23300 GGCAACCTGTCGGCGCTGCGCGACTGGGGCCATGCGCGCGACTACGTCGAAATGCAGTGG 23359 Query 161645 TTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGG 161691 ||||| | || ||||| || || || ||||| || || ||||| || Sbjct 23360 CTGATGCTGCAGCAGGACACGCCGGAGGACTACGTCATCGCCACCGG 23406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729856616164120