Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq1741 230 3e-55 >seq1741 Length=9891 Score = 230 bits (254), Expect = 3e-55 Identities = 294/405 (73%), Gaps = 0/405 (0%) Strand=Plus/Plus Query 180626 AACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGA 180685 |||||| || || ||||| | ||||||||| || |||||||| || || ||| | Sbjct 3 AACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTTAA 62 Query 180686 TTCAACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGAT 180745 |||| |||| || ||||| || || ||||| || |||||||| |||||||| || || Sbjct 63 CCCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAAAT 122 Query 180746 CTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGT 180805 || ||| | || ||||| ||||| || ||| | || ||||| ||||| ||||| || || Sbjct 123 TTTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCAGT 182 Query 180806 TATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTA 180865 | ||||| |||| ||||||| || | ||| | ||| | ||| | |||||||| Sbjct 183 AACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCTTTAAACTTACGTGCTTA 242 Query 180866 CGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACAC 180925 |||||||| ||||| || | || || ||||||||||||||||| || ||||| || Sbjct 243 TGATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTATAC 302 Query 180926 CAAGAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACA 180985 || || || || || || ||||| | ||||| ||| |||| || ||||| || || Sbjct 303 AAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCA 362 Query 180986 CGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030 ||||| | | |||||||| || ||| ||||| | || ||||| Sbjct 363 TGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGC 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610268574669120