Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq113 104 3e-17 seq907 91.5 2e-13 >seq113 Length=41445 Score = 104 bits (114), Expect = 3e-17 Identities = 363/555 (65%), Gaps = 19/555 (3%) Strand=Plus/Minus Query 124490 GATAAACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAATCGA 124549 ||| ||||| || | ||||| | | || ||| | || ||| | || || || | Sbjct 23434 GATGAACTCGCGCACGCTGTACTGCATGCCGGTGGCGATGACGTAGTCCTCCGGCGTGTC 23375 Query 124550 CTGCTGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTT 124609 |||||||| ||| |||||| || ||||||||| || || |||||||||||| Sbjct 23374 CTGCTGCAGCATCAGCCACTGCATTTCGACGTAGTCGCGCGCATGGCCCCAGTCGCGCAG 23315 Query 124610 GGCATCCAGGTTTCCGAGCTCGATTGGCTTGGCCGTCTTGTTC--CAC--TCCG--CCAA 124663 || |||||| || || | | ||| | | | | | | ||| | || ||| Sbjct 23314 CGCCGACAGGTTGCCCAGGTACA--GGCATTCCTG-CAGGCCCAGCACGATGCGGGCCAG 23258 Query 124664 ACCCAGTGTAATCTTGCGCGTCACAAA---CTCGGAACCGCG-TCGCTCAGACTCGTGGT 124719 || | || |||||||||||||| || |||| ||||| | | | || ||||||| Sbjct 23257 GCCGCGGGTGATCTTGCGCGTCACGAAGGTCTCG---CCGCGCTTGGGC-GATTCGTGGT 23202 Query 124720 TGAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCC 124779 ||||||| || || | || ||| |||| ||||| | |||||||||||| | |||| Sbjct 23201 TGAACAGGATCCCGTTGCAGGCATACATGCCGTAGGCCTCGCGGTAGTTCACGCTGATCC 23142 Query 124780 AATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGTGTTTTCAT 124839 | || | | ||||||| | || | |||||||| ||||| ||||| || ||| |||| Sbjct 23141 AGTAGGCGTACAGCTTGGCCGCGGCGTAGGGGCTGCGGGGATAGAACGGCGTGCTTTCGC 23082 Query 124840 TTTGGGTAGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGATAGAA-TTTG 124898 || | | || ||| | | ||| ||| ||| || || ||||| ||||| | Sbjct 23081 GCTGCGGCGTTTCCTGCACCAGCCCGTACAGCTCGGAGGTCGAGGCCTGGTAGAAGCGCG 23022 Query 124899 AATTTTGAAATAGAATTCGTTTGACGAATTGCCTCCAAGATCCGAAGGGTTCCCATGGCG 124958 || | || | | || || || || |||| | || ||||| |||| | || Sbjct 23021 CCTTGTCCTCCAGCTTGAGGATG-CGGATGGCTTCCAGCAGGCGCAGGGTGCCCAGGCCG 22963 Query 124959 TCCACATTGGCGGTATACTCGGGCTGATCAAAAGACAGTTTCACATGGGACTGGGCACCT 125018 || | |||||||| ||||| |||| || || |||| || ||| ||| || | Sbjct 22962 TCGGCGTTGGCGGTGTACTCCGGCTCTTCGAACGACACCCCGACGTGGCTCTGCGCCGCC 22903 Query 125019 AGGTTGTACACCTCG 125033 |||||||| | |||| Sbjct 22902 AGGTTGTAGATCTCG 22888 >seq907 Length=16333 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 ||||| ||||| ||||| |||||||| | ||| ||||||| |||||||| || |||| Sbjct 11303 AGGCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGACCCGGAGAAG 11244 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 |||||||| || ||||||||||| || | || || | ||| ||| Sbjct 11243 AAGATGCCCTCCACACACGCAAACGCAATCAGACGCTCCGCAAAC 11199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547161285240200