Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028778.1 Length=75626 Score E Sequences producing significant alignments: (Bits) Value seq5 100 1e-16 seq15 84.2 1e-11 >seq5 Length=148305 Score = 100 bits (110), Expect = 1e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 55434 GGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCCGGCGTGGCGGTCGCTCAG 55493 ||||||||||| || || || || ||| ||| | | | ||| || | ||||| | Sbjct 31283 GGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAGAACGGGCTGCCCGTCGCGAAC 31224 Query 55494 TTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAAGCAGACGAACGAGTGGGAGGACGGC 55553 ||| | | ||||| || ||||||| |||| || ||| ||||||||||| |||||||| Sbjct 31223 TTCACCATCGCGTCGACCCCCCGCACGTTCGACCGTCAGGCGAACGAGTGGAAGGACGGC 31164 Query 55554 GAAACCGTGTTCCTCCGTACGTCGGTGTGGCGCGAGCTTGCAGAGGGCGCGGC 55606 || || ||||||| || ||||||| ||||| ||| | || ||| || ||| Sbjct 31163 GAGGCCCTGTTCCTGCGGGCGTCGGTCTGGCGTGAGTTCGCCGAGCACGTGGC 31111 >seq15 Length=81684 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 63637 CGGTAGCTCAACTGGTAGAGCAGTGGTCTCCAAAGCCACCGGTTGCAGGTTCGACTCCTG 63696 ||||||||||| ||| ||||||| |||||||||| || | |||||||||||||| ||||| Sbjct 16578 CGGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 16637 Query 63697 TCCG 63700 |||| Sbjct 16638 TCCG 16641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241854819803893