Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq706 401 3e-107 seq240 343 7e-90 seq5 109 3e-19 >seq706 Length=18769 Score = 401 bits (444), Expect = 3e-107 Identities = 577/806 (72%), Gaps = 13/806 (2%) Strand=Plus/Plus Query 64052 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 64111 || || ||||| |||||||| || ||||| || |||| ||| || ||| |||| || Sbjct 13747 GTCGAAGTCATCCCCACCGGTTCCATCGCCCTCGACGTCGCCCTCGGCGTCGGTGGTCTT 13806 Query 64112 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 64171 || | ||||| | | || |||||||| || || || || || ||| | || ||| Sbjct 13807 CCTCGCGGCCGCATCATCGAGATCTACGGTCCGGAGTCGTCGGGTAAGACCACGCTGACC 13866 Query 64172 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 64231 ||||||||| | ||||| | |||| || || |||| |||||| | ||||||||| ||| Sbjct 13867 CTCCACGCGATCGCCAACGTGCAGCGCGCGGGCGGCATCGCCGCATTCATCGACGCCGAG 13926 Query 64232 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 64291 ||| | || ||||| || |||||| | |||||| || ||| ||||| | || | || Sbjct 13927 CACGCGCTCGACCCCGACTACGCCGCGAAGCTCGGCGTCGACATCGACCAGCTGCTCGTC 13986 Query 64292 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 64351 ||||| ||||| || |||||||| || ||||||| ||| | ||||| || ||| Sbjct 13987 TCGCAGCCCGACACCGGTGAGCAGGCGCTCGAGATCGCCGACATGCTCGTGCGTTCGGGC 14046 Query 64352 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 64411 | | | | |||||| | ||||| || || ||||| || || |||||| ||||| Sbjct 14047 GCAATCGACCTGGTCGTCATCGACTCGGTCGCCGCCCTCGTCCCCAAGGCCGAGATCGAA 14106 Query 64412 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 64471 ||||| || || ||| ||||| |||||||| |||||| | ||||||||||| | || Sbjct 14107 GGCGAGATGGGCGACTCGCACGTGGGCCTGCAGGCGCGCTTGATGTCGCAGGCGCTCCGG 14166 Query 64472 AAGCTCACCGG-CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCG 64530 ||||||||||| || |||| ||||| || || ||| |||||||| |||| Sbjct 14167 AAGCTCACCGGTGGCCTGAACCAG-ACCAAGACCACCGCGATCTTCATCAACCAGCTGCG 14225 Query 64531 CGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTT 64590 |||||||||||| ||| || |||| || ||||||||| | ||||| ||||| | Sbjct 14226 CGAGAAGATCGG---CGTCTTCTTCGGCTCGCCCGAGACCACTGCCGGCGGGAAGGCGCT 14282 Query 64591 GAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 64650 | ||||||||| || || ||| | || |||| ||||||| || |||||| || Sbjct 14283 CAAGTTCTACGCGTCGGTACGCCTCGACATCCGCCGCATCGAGACGCTGAAGGACGGTAC 14342 Query 64651 TGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCA 64710 || || ||||| |||||||| || || |||||||||||||||||| |||| ||||| Sbjct 14343 CGACGCGGTCGGTAACCGCACTCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTT 14402 Query 64711 CCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAA--CTC 64768 | | || |||||| | || ||| ||| |||||||||||| || | ||| ||| Sbjct 14403 CAAGCAGGCGGAGTTCGACATCCTGTTCGGCACGGGCATCTCGCGCGAAG--GAAGCCTC 14460 Query 64769 CTCGACCTGGCCGTGTC--GCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 64826 ||||| | | ||||| ||| ||| | || ||||||||||| ||||||| || |||| Sbjct 14461 ATCGACTT--CGGTGTCGAGCACGGCATCGTCAAGAAGTCGGGTGCCTGGTACACCTACG 14518 Query 64827 GGGACAAGAACGTCGCCCAGGGCAAG 64852 | | || | ||| ||||||||| Sbjct 14519 ACGGCGAGCAGCTCGGTCAGGGCAAG 14544 >seq240 Length=32197 Score = 343 bits (380), Expect = 7e-90 Identities = 548/786 (70%), Gaps = 3/786 (0%) Strand=Plus/Plus Query 64067 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 64126 |||||||| | | ||||||| ||| |||||| |||| || ||| | ||||| ||| Sbjct 30985 ACCGGCTCGCTGGGTCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCGTG 31044 Query 64127 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 64186 |||||||||||||| || ||||| || || ||| | || ||| || || | ||||| Sbjct 31045 GTGGAAATCTACGGTCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGTCGTGGCT 31104 Query 64187 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCT 64246 | ||| ||| ||| |||| | ||||| | ||||||| || ||| | |||||| Sbjct 31105 GAAATGCAAAAGATCGGCGGCACCTGCGCCTTCGTCGACGCCGAACACGCGCTGGACGTG 31164 Query 64247 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACT 64306 |||||||| | ||| || || |||| | | |||| || | ||||||||||| Sbjct 31165 CAGTACGCCTCGAAGCTGGGCGTCAACCTGGCCGACCTGCTGATCTCGCAGCCGGACACG 31224 Query 64307 GGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTC 64366 || |||||||| ||||| ||| ||| || || || || | | | | || Sbjct 31225 GGTGAGCAGGCGCTGGAAATCACCGACGCGCTGGTGCGCTCGGGTTCGGTCGACCTGATC 31284 Query 64367 GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGAC 64426 || || ||||| || |||||||||||||| ||||| |||||||||| || || || Sbjct 31285 GTGGTCGACTCGGTCGCGGCCCTGGTGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGAT 31344 Query 64427 AGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACC 64486 | ||||||||| || ||||| ||| ||||| |||||||||| |||| |||| Sbjct 31345 TCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCACC 31404 Query 64487 ATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAAC 64546 ||| | |||||| || ||| |||||||| | ||| ||||||||| | Sbjct 31405 ATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGG---C 31461 Query 64547 GTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCA 64606 ||| | |||| ||| |||||||| |||||||| || | | |||||||||||| Sbjct 31462 GTGATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACGCGCTCAAGTTCTACGCCTCG 31521 Query 64607 GTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAAC 64666 || ||| |||| |||| ||||||| | | ||| | ||||| |||| ||||||||| Sbjct 31522 GTGCGCCTGGACATCCGCCGCATCGGCTCGATCAAGAAGGGCGACGAGGTCGTCGGCAAC 31581 Query 64667 CGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTC 64726 ||||| || ||||| |||||||||||| | || || ||| | | ||||||||| Sbjct 31582 GAAACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCGCCCCCGTTCAAGCAGGCCGAGTTC 31641 Query 64727 TCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCG 64786 | || ||||||| | ||||||||||| || | |||| || ||||||||| |||| | Sbjct 31642 GACATCATGTACGGCGCCGGCATCTCGCGCGAAGGCGAAATCATCGACCTGGGCGTGGCC 31701 Query 64787 CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCCCAG 64846 | ||||| | ||||| ||||| |||| || ||| | ||| | ||| |||| Sbjct 31702 GCCAACGTGGTGGACAAGTCCGGCGCGTGGTACAGCTACAACGGCAACCGCATCGGCCAG 31761 Query 64847 GGCAAG 64852 |||||| Sbjct 31762 GGCAAG 31767 >seq5 Length=148305 Score = 109 bits (120), Expect = 3e-19 Identities = 212/304 (70%), Gaps = 13/304 (4%) Strand=Plus/Minus Query 58329 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 58388 |||| |||| ||| || ||||||||||||||||||| ||| || |||| | |||||| Sbjct 31288 TCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAGAACGGGCTGCCCGTCG 31229 Query 58389 CCAACTTCACCGTCGTGTCCAACGAACGCCGC-CG--CGACGCCCAGGGCAAC---TGGG 58442 | ||||||||| ||| ||| | | | |||| || |||| |||| ||| ||| Sbjct 31228 CGAACTTCACCATCGCGTCGACC---CCCCGCACGTTCGACCGTCAGGCGAACGAGTGGA 31172 Query 58443 TCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGG 58502 |||||||| ||| ||||| || | ||||||| || ||||||| |||||| Sbjct 31171 AGGACGGCGAGGCCCTGTTCCTGCGGGCGTCGGTCTGGCGTGAGTTCGCCGAGCACGTGG 31112 Query 58503 CGGAAAGCCTCCAGAAAGGCCAG-CGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCC 58561 ||| || | |||| ||| || ||||||| | || || ||||||||| Sbjct 31111 CGGGTTCGCT-GACCAAGGGCAGCCGTGTCATCGCGACCGGTCGTCTGCGTCAGCGCTCC 31053 Query 58562 TTCGA-GACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGG 58620 | | | |||| | |||| | | ||||||| |||||| | ||||| ||||||||||| Sbjct 31052 TACCAGGACCGTGACGGGC-AGACCCGCACCGCCATCGAACTCGAGGTGGACGAGATCGG 30994 Query 58621 CCCG 58624 |||| Sbjct 30993 CCCG 30990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232780504525289