Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028843.1 Length=75816 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 5e-16 seq15 86.0 3e-12 >seq5 Length=148305 Score = 98.7 bits (108), Expect = 5e-16 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 55285 GGGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCTGGCGTGGCGGTCGCTCA 55344 |||||||||||| || || || || ||| ||| | | | || || | ||||| | Sbjct 31284 GGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAGAACGGGCTGCCCGTCGCGAA 31225 Query 55345 GTTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAAGCAGACGAACGAGTGGGAGGACGG 55404 ||| | | ||||| || ||||||| |||| || ||| ||||||||||| ||||||| Sbjct 31224 CTTCACCATCGCGTCGACCCCCCGCACGTTCGACCGTCAGGCGAACGAGTGGAAGGACGG 31165 Query 55405 CGAAACCGTGTTCCTCCGTACGTCGGTGTGGCGCGAGCTTGCAGAGGGCGCGGC 55458 ||| || ||||||| || ||||||| ||||| ||| | || ||| || ||| Sbjct 31164 CGAGGCCCTGTTCCTGCGGGCGTCGGTCTGGCGTGAGTTCGCCGAGCACGTGGC 31111 >seq15 Length=81684 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 63756 TCTCTTAGCTCGGTAGCTCAACTGGTAGAGCAGTGGTCTCCAAAGCCACCGGTTGCAGGT 63815 ||||| || ||||||||||| ||| ||||||| |||||||||| || | |||||||||| Sbjct 16569 TCTCT-AGGGCGGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGT 16627 Query 63816 TCGACTCCTGTCCG 63829 |||| ||||||||| Sbjct 16628 TCGATTCCTGTCCG 16641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242462760531303