Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028869.1 Length=153714 Score E Sequences producing significant alignments: (Bits) Value seq688 98.7 1e-15 seq4104 86.0 6e-12 >seq688 Length=19146 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 113798 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 113857 || |||||||| || |||| || ||||| ||| | |||| | ||| |||||||| Sbjct 4307 GGTCCGGGCCGCGGGTCCGGCGCGGGCTCCATGGCCGCCTATGCGATGCGCATCACCGAC 4366 Query 113858 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 113917 |||||||| | || ||| ||||| |||||||| ||| ||||||| ||||| | | Sbjct 4367 CTCGACCCGCTGCAGCACGGTCTGATCTTCGAGCGGTTCCTCAACCCCGACCGTGTCTCC 4426 Query 113918 TTCCCCGACATCGACGTCGACTTC 113941 | |||||| |||||||||||||| Sbjct 4427 ATGCCCGACTTCGACGTCGACTTC 4450 >seq4104 Length=3717 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 113799 GCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCGA 113858 ||| |||||| ||||| || | ||| ||| |||||| | ||| |||||||| Sbjct 1211 GCCAGGGCCGCGGCTCGGCGGCGAACTCTGCCGTCTGCTACGTGCTCGGCGTCACCTCGG 1270 Query 113859 TCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGACT 113918 |||| |||| |||| ||| ||| ||||||||||||||||| | ||| || || Sbjct 1271 TCGATCCGACCAAGGTCGATCTGCTGTTCGAGCGCTTCATCTCCAAGGAGCGGTTGGAGC 1330 Query 113919 TCCCCGACATCGACGTCGACTTCCAGAAGTCG 113950 ||||||||||||||||| ||| || | ||| Sbjct 1331 CGCCCGACATCGACGTCGATTTCGAGCATTCG 1362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491707630466960