Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028878.1 Length=76271 Score E Sequences producing significant alignments: (Bits) Value seq180 111 8e-20 seq5 102 4e-17 >seq180 Length=35712 Score = 111 bits (122), Expect = 8e-20 Identities = 168/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 51154 GCTTGACCCGCACGTGGGTGTGATCTACGGCGACTCGATCACGCTTGAGCGCGCCGAGCG 51213 ||| ||||||||||| || ||||||||||||| || |||||||| | ||| | | ||| Sbjct 29162 GCTGGACCCGCACGTCGGCCTGATCTACGGCGATTCCATCACGCTGGCGCGTGGCC-GCG 29104 Query 51214 -CATCACCGCGCGTATGGAGCGGCTGGGTTATGCGTCGTCCAACGTGGTGTTTGGGGTCG 51272 |||| | ||| |||| | ||| | |||||| ||||||||| | || ||| Sbjct 29103 ACATCCTGGTGCGGTTGGAAAGAAAGGGGTTTGCGTCCGGCAACGTGGTCCTGGGCATCG 29044 Query 51273 GGTCGTTCACGTACCAGTACAACACCCGCGACACGTTCGGGTCCGCGATGAAAGCGACGT 51332 | || | ||| ||||| ||| |||||||||| ||||| | ||| | || ||||||| Sbjct 29043 GCTCCTACACCTACCAATACCTGACCCGCGACAGCTTCGGCTGGGCGCTCAAGGCGACGT 28984 Query 51333 GGGCTGAGGTCGACGGC-AAGGGCTACAACCTGCTTAAGAATCCGGTGACCGAC 51385 || |||||| | ||| || || ||| || | ||| | |||||||||||| Sbjct 28983 ACGCCGAGGTCAATGGCGAACCGCAGGAAC-TGGTGAAGGACCCGGTGACCGAC 28931 >seq5 Length=148305 Score = 102 bits (112), Expect = 4e-17 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 62880 GTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAATCCTG 62938 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 79766 GTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAAGTCGCAGGTTCAAATCCTG 79708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243918618589048