Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq239 87.8 5e-13 seq5206 84.2 6e-12 >seq239 Length=32267 Score = 87.8 bits (96), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 2/72 (3%) Strand=Plus/Plus Query 31253 TTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTA-- 31310 ||||||| | || ||||||||||||| || ||||||||||||||||||||||||||| Sbjct 18006 TTGGCTGGGGAGGAAGGATTCGAACCTTCGCATGCCGGAATCAAAATCCGGTGCCTTAAC 18065 Query 31311 CCGCTTGGCGAC 31322 | |||||||||| Sbjct 18066 CAGCTTGGCGAC 18077 >seq5206 Length=2515 Score = 84.2 bits (92), Expect = 6e-12 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 31254 TGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCG 31313 |||||| | ||| ||| |||||||| |||||| ||||||||||||||| |||||||||| Sbjct 66 TGGCTGGGGCGGGAGGGATCGAACCTCCGAATGGCGGAATCAAAATCCGCTGCCTTACCG 7 Query 31314 CTTGGC 31319 |||||| Sbjct 6 CTTGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138185272793106