Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028904.1 Length=49452 Score E Sequences producing significant alignments: (Bits) Value seq706 311 3e-80 >seq706 Length=18769 Score = 311 bits (344), Expect = 3e-80 Identities = 416/576 (72%), Gaps = 7/576 (1%) Strand=Plus/Minus Query 39167 GTCACGGGGCCACTCGCCCGTTCATCTCGAAGGCGAGGTGCGTGATGGGCATCGTGTCGA 39226 |||| ||||| || ||||||||| ||| ||| |||||||| |||||| ||| Sbjct 3287 GTCAGGGGGCGACGCGCCCGTTCGCGGTGAACGCGGCGTGCGTGAGGGGCATGAGCTCGC 3228 Query 39227 TGAAGGCCACCTCCATCTCGTCGGCCACCATCTCGATCTCCCGGAGAGGGAAGCTCGGAA 39286 || | ||||||||| || || |||||||||||| || | ||||| ||| | Sbjct 3227 GCCAGTACGCCTCCATCTGCTCCGCGCACATCTCGATCTCACGCTGCGGGAACGACGGGA 3168 Query 39287 CCTTCGCGTTCTCGCGCTGGGTCCGGAGGCTGAGGAAGCTCATCAGGGAGCGTGCGTTGC 39346 | | | |||| || ||| || || ||||||| ||||||| ||||| |||||| Sbjct 3167 ACCGAGTGCCCTCGACCTTGGTGCGCAGCGAGAGGAAGTTCATCAGCGAGCGGGCGTTGA 3108 Query 39347 ACGTCGCGTAGAAGGAGGTGTAGATGCCGACCGGCAGGACGTTGCGCGCTACCTCGCGGG 39406 |||| |||| | || | ||||||| | |||||| ||| ||||||| ||||| |||| Sbjct 3107 CCGTCACGTACATCGACGAGTAGATGTTCAGCGGCAGCACGATGCGCGCGACCTCACGGG 3048 Query 39407 CGACGCCCGCACCGAGCTGGTTCTGGTACGCCTGCCAGGCGGCGCGGTAGGCGTCCTTCG 39466 |||||||||| ||||| | ||| || |||| |||||||| ||||| || || Sbjct 3047 CGACGCCCGCCTCGAGCATGCGCTGATAGGCCTCGAAGGCGGCGATCGAGGCGGCC--CG 2990 Query 39467 AGGAGGCCGTGACGCT--CATGTACTGGCCGAGGGTGCCCGGCTCGAAGCGGTAGGCACC 39524 || | | | | | | | ||| || | |||| || ||| ||| || || Sbjct 2989 AGTCGTCTCGGCCACCAGCGCGACCTGCTCGTCGCTGCCGGGGAGGAACTCGTACGCGCC 2930 Query 39525 GGGCTTGCCGACCTGGACGAGGTTGCGGTCCGAGGCAGGCACGTAGAAGACCGGGTCGAG 39584 ||||||||||||||| | |||||||| || | | | ||||||||||| ||||| || Sbjct 2929 GGGCTTGCCGACCTGCAGCAGGTTGCGCTCGGGGCCGGGCACGTAGAACACCGGACGCAG 2870 Query 39585 CTCCTTGTACCGGCCCGACTCCTCGTTGTAGCTGAAGCCGATGCGGTGGCGGAAGAACTC 39644 ||| ||| ||||||||||||||||||||||| ||||||||||||| | |||||| Sbjct 2869 CTCGCGGTAGCGGCCCGACTCCTCGTTGTAGCTCG---CGATGCGGTGGCGCATGAACTC 2813 Query 39645 GCGGGCCACGAAGATCGGGGCCTCGATGTAGAAGACGAAGTGGTTGTGCTCGAACGGGGA 39704 |||| ||||||||| || |||| | ||||||| || ||||||||||||||| || Sbjct 2812 GCGGAACACGAAGATGGGCGCCTGCACGTAGAAGGTGAGCGAGTTGTGCTCGAACGGCGA 2753 Query 39705 GCCGTGCCTGTCGCGCATGAGGTAGTTGATGAGCCC 39740 |||||| | ||||||||| |||||||||||||| || Sbjct 2752 GCCGTGACGGTCGCGCATCAGGTAGTTGATGAGGCC 2717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158109780021732