Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028923.1 Length=58472 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 2e-14 >seq5 Length=148305 Score = 93.3 bits (102), Expect = 2e-14 Identities = 286/439 (65%), Gaps = 10/439 (2%) Strand=Plus/Minus Query 44677 CGGCGCAATGGGATCGCACCAGTCCACACGCGCTCAGTCACATGTGTGGCTCACACCGCG 44736 ||| |||||||| |||||||||| | ||||| | || |||||||| |||| Sbjct 29287 CGGAGCAATGGGCGCGCACCAGTCAGCGCGCGCCGACACAACGACATGGCTCACGCCGCC 29228 Query 44737 CCATATCCTCGATGCACTGGGGGAGTTTGATCTAGATCCGTGCGCAGCACCTAACCCGAT 44796 | | ||| |||| |||||| ||| ||||| || |||||||| || || ||| Sbjct 29227 CGACATCATCGAGAAACTGGGTCCGTTCGATCTCGACCCGTGCGCCGCTCCGTCGCCGCG 29168 Query 44797 CGCGTGGCCGACTGCACGTGTCCACTACATC---CCACCCACTGATGGGCTGTGCGAGCC 44853 | |||||||||| || | | | | | ||| | ||| || || || || ||| Sbjct 29167 CCCGTGGCCGACCGC--GGGGCGGC-ATATCGAGCTTCCCGAGGACGGCCTC-GCT-GCC 29113 Query 44854 G--TGGTTTGGACGTGTGTGGTTGAACCCGCCATATGGGTCGGCAGTTNNNNNNNNNCTG 44911 | ||| || | ||||||| | || ||||| || | | || | || Sbjct 29112 GACTGGACGGGTCATGTGTGGCTCAATCCGCCGTACAGCTTCGCCGCGTGGAAGTGGCTA 29053 Query 44912 GATAAGCTCGCCGAGCACGGGCAAGGGACAGCGTTAATCTTCGCTAGAACCGAGACCTCA 44971 || |||||||| | |||||| | || | ||| | |||||||| | || ||||| | Sbjct 29052 GACAAGCTCGCGGCGCACGGTGATGGCATCGCGCTCATCTTCGCACGCACGGAGACGGCG 28993 Query 44972 GGGTTTGTGGACCAGGTGTGGAAGAGGGCCTCCGCGATCCGGTTCCTGCACGGAAGGTTG 45031 || || || | ||||||||| ||| ||| | | | | |||||| ||||| || | Sbjct 28992 GGCTTCGTCGCACAGGTGTGGGAGAAGGCGACAGGTGTGCTGTTCCTTCACGGGCGGCTC 28933 Query 45032 CATTTCCACCGCCCTGATGGCACTCGTGCGGCAGGCAACTCCGGTGCTCCGTCGTGCCTG 45091 | |||||||| || || || || || || | ||| ||| || ||||||||||| Sbjct 28932 TACTTCCACCGGCCCGACGGTGAACGCGCCGCGGCGAACAGCGGAGCACCGTCGTGCCTC 28873 Query 45092 GTGGCGTATGGCGACCGTG 45110 || ||||| || | |||| Sbjct 28872 GTCGCGTACGGGGCGCGTG 28854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186971038284492