Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq1622 93.3 6e-14 >seq1622 Length=10495 Score = 93.3 bits (102), Expect = 6e-14 Identities = 284/433 (66%), Gaps = 22/433 (5%) Strand=Plus/Minus Query 145256 TACCTTGTGGGCGGCGCGGTCCGCGACCTGAAGATGGGCATGATGCCGAAGGACGAAGAT 145315 ||| | |||||||| ||||| ||||| | | | ||| ||| ||| || | || Sbjct 8540 TACATCGTGGGCGGGGCGGTGCGCGATGCGCTGCTCGGCCTGACGCCCGGCGATCACGAC 8481 Query 145316 TACGTGTGGGTCGGTGCGACTCCTGCCGATATGATCGATATG-GGCATGAAGCAGGTTGG 145374 | ||| |||||| || || || | || ||| || | ||| | | || ||| || Sbjct 8480 TGGGTGGTGGTCGGCGCCACGCCCGAGGACATGG-CGCGGCGCGGCTTCATGCCGGTGGG 8422 Query 145375 CGCGGATTTCCCGGTGTTCCTTGACGC----ACAAAACCGCGAACACGCACTCGCCCGGA 145430 || ||||||||||||||||| || | || ||| | ||| |||| || || || | Sbjct 8421 CGGCGATTTCCCGGTGTTCCTGCACCCGGTGACCAAAGAG-GAATACGCGCTGGCGCGCA 8363 Query 145431 TCGAACGCAAGACCGGCGAAGGCTACAAGGGATTCGAATGCGCCTTTGACA----CGTCG 145486 ||| |||||| | ||| ||||||||||| || | |||| ||| || || Sbjct 8362 CCGAGCGCAAGTCGGGCCGCGGCTACAAGGGCTT------CACCTTCTACACCGGCGCCG 8309 Query 145487 A--TCACCATCGAACAAGACCTGATGCGCCGCGATCTTACCATCAACGCCATGGCAATGT 145544 | | || | ||| |||||||| |||||||| || ||| |||||||||| || | Sbjct 8308 ACGTTACGCTTGAAGAAGACCTGCGCCGCCGCGACCTGACCGTCAACGCCATCGCGCAGA 8249 Query 145545 TTATGGATGGTCAAATCATCGATCCGTTCGGCGGCATGGACGATCTGAAAAACAAGGTGC 145604 ||| || | | |||| ||| |||||||| | |||| || | ||| Sbjct 8248 AGCAGGACGGCGAGCTGGTCGACCCGCTCGGCGGCGCCGCCGATGTGCGGGCGCATGTGT 8189 Query 145605 TTCGCCACGTCAATGCGGAAACCTTCAAGGAAGACCCGCTTCGCGTGCTGCGCGTTGCCC 145664 | ||||||||| | || ||||| |||||||||| | ||| | |||||| | |||| Sbjct 8188 TCCGCCACGTC---GGCGAGGCCTTCGAGGAAGACCCCGTGCGCATCCTGCGCCTGGCCC 8132 Query 145665 GTTTCCTTGCGCG 145677 | ||| ||||| Sbjct 8131 GCTTCGCCGCGCG 8119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661287472906920