Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq3386 95.1 2e-14 >seq3386 Length=4835 Score = 95.1 bits (104), Expect = 2e-14 Identities = 186/266 (70%), Gaps = 8/266 (3%) Strand=Plus/Minus Query 234586 GTGGAGTACGTCCGTATTCCGCGTAACGTACTGGCACTGTGCATCGGTAAGTCGACTATC 234645 ||||| ||| |||| |||||||| | ||| ||| | | ||| | || ||| || | Sbjct 2426 GTGGAATACTTCCGCATTCCGCGCAGCGTGCTGACGATCTGCCTGGGCAAGAGCACCTAC 2367 Query 234646 GCCCGTGTGGGCATCAACTGTCT--GTGCACTCCGATCGAACCGGAATGGGAAGGCCACA 234703 || || ||||||| | ||| ||| || ||| | ||||| ||||||||||||||| Sbjct 2366 GCGCGCTGCGGCATCATC-GTCAACGTG-ACGCCGCTGGAACCCGAATGGGAAGGCCACG 2309 Query 234704 TCACCTTCGAATTCCACAACACTCTCGAT-CAACCGAACACCTTCTATGCCAACGAAGG- 234761 |||| | |||||| ||||| | || | ||| || |||||||| |||||| Sbjct 2308 TCACGCTGGAATTCTCGAACAC-CACGCCGCTGCCGGCCAAGATCTATGCCGGCGAAGGC 2250 Query 234762 TGTACTGCAACTGGTCTTCATCGAAGGCGATGAGCCGTGCATTACTTCGTATGCCGATCG 234821 || | || || | ||| | ||| |||| ||| ||| || ||||| ||||| || Sbjct 2249 TGCGCC-CAGATGCTGTTCCTGGAAAGCGACGAGATCTGCGAGACCTCGTACGCCGACCG 2191 Query 234822 TGGCGGTAAGTACCAGGGTCAGGGCG 234847 |||||| ||||||||||| ||| ||| Sbjct 2190 TGGCGGCAAGTACCAGGGCCAGCGCG 2165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989233005899847