Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_029065.1 Length=98765 Score E Sequences producing significant alignments: (Bits) Value seq180 87.8 1e-12 >seq180 Length=35712 Score = 87.8 bits (96), Expect = 1e-12 Identities = 265/397 (67%), Gaps = 17/397 (4%) Strand=Plus/Minus Query 85505 ACCGTTGATCAAATGGCTGCACTGCACGATCTGGGCTACCTGCCACTGGAGTTCCGTTCG 85564 ||||| ||||| || || ||| |||| |||||||| ||||| ||||| ||||||| Sbjct 30079 ACCGTCGATCACCTGCAGGCGCTGTACGAGCTGGGCTATCTGCCGCTGGAAATCCGTTCC 30020 Query 85565 CTGCCTGAAGGCTCGCTGGTTCCGATGGGTATTCCTGTCCTGACCATCACCAACACGCTG 85624 ||||| |||||| | | || || | | || | | ||| || |||||| | Sbjct 30019 CTGCCCGAAGGCGCCCGCGTCGACATCCGCGTGCCGCCCGTCACCTTCGTCAACACCAAG 29960 Query 85625 CCTGAGTTCTTCTGGTTGGTTAACTACCACGAAACTCCGCTGTCCACCACCA---CTTGG 85681 || || ||| |||| |||| | |||| |||||| ||||| || | | | ||| Sbjct 29959 CCGGAATTCGCCTGGCTGGTCACCTACATCGAAAC---GCTGTTCAGCTGCGAATCGTGG 29903 Query 85682 AAGACAGCAACCAACGCAACGATTGCACGTGAATATCGCAAGATTTGCGAGC-ACTACAC 85740 ||| | | ||| || || || || |||||||||||| | | || | ||| | | Sbjct 29902 AAGCCGTCCACCGTGGCCACCATCGCCTTCGAATATCGCAAGCTCTT-GACCTACTTCGC 29844 Query 85741 CAAGCTGACTGGCTGCTACGATGC-CTTCACTGTCT-CGGTTATGTGCCACGACTTCTCG 85798 | ||||| ||| || ||||| |||| ||| | | | | |||||||||||||| Sbjct 29843 CCGCCTGACCGGCAGCC-CGATGGACTTC---GTCAACTGGCAAG-GCCACGACTTCTCG 29789 Query 85799 ATGCGTGGGATGAGCGGTATTGAAGACG-CTGCACGTAGCGGTATCGGCCACTTGACTCA 85857 ||||| || ||| ||| | | |||| | ||| | ||||| ||||||| || Sbjct 29788 ATGCGCGGCATGTCCGGCCTGTACGACGCCCGCAAG-AGCGGCGCCGGCCACCTGCTGTC 29730 Query 85858 GTTCATCGGCACTGATACCCTGCCAGCAATCACCTAC 85894 ||||| |||||| || ||| | || || ||| |||| Sbjct 29729 GTTCACCGGCACCGACACCATCCCGGCCATCGACTAC 29693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 315892401338314