Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq706 392 2e-104 seq240 336 1e-87 seq5 102 4e-17 >seq706 Length=18769 Score = 392 bits (434), Expect = 2e-104 Identities = 575/806 (71%), Gaps = 13/806 (2%) Strand=Plus/Plus Query 66081 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 66140 || || ||||| |||||||| || ||||| || |||| ||| || ||| |||| || Sbjct 13747 GTCGAAGTCATCCCCACCGGTTCCATCGCCCTCGACGTCGCCCTCGGCGTCGGTGGTCTT 13806 Query 66141 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66200 || | ||||| | | || |||||||| || || || || || ||| | || ||| Sbjct 13807 CCTCGCGGCCGCATCATCGAGATCTACGGTCCGGAGTCGTCGGGTAAGACCACGCTGACC 13866 Query 66201 CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCTGCCTACATCGACGCTGAG 66260 ||||||||| | ||||| | ||| || || |||| ||| || | ||||||||| ||| Sbjct 13867 CTCCACGCGATCGCCAACGTGCAGCGCGCGGGCGGCATCGCCGCATTCATCGACGCCGAG 13926 Query 66261 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66320 ||| | || ||||| || |||||| | |||||| || ||| ||||| | || | || Sbjct 13927 CACGCGCTCGACCCCGACTACGCCGCGAAGCTCGGCGTCGACATCGACCAGCTGCTCGTC 13986 Query 66321 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66380 ||||| ||||| || |||||||| || ||||||| ||| | ||||| || ||| Sbjct 13987 TCGCAGCCCGACACCGGTGAGCAGGCGCTCGAGATCGCCGACATGCTCGTGCGTTCGGGC 14046 Query 66381 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66440 | | | | |||||| | ||||| || || ||||| || || |||||| ||||| Sbjct 14047 GCAATCGACCTGGTCGTCATCGACTCGGTCGCCGCCCTCGTCCCCAAGGCCGAGATCGAA 14106 Query 66441 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 66500 ||||| || || ||| ||||| |||||||| |||||| | ||||||||||| | || Sbjct 14107 GGCGAGATGGGCGACTCGCACGTGGGCCTGCAGGCGCGCTTGATGTCGCAGGCGCTCCGG 14166 Query 66501 AAGCTCACCGG-CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCG 66559 ||||||||||| || |||| ||||| || || ||| |||||||| |||| Sbjct 14167 AAGCTCACCGGTGGCCTGAACCAG-ACCAAGACCACCGCGATCTTCATCAACCAGCTGCG 14225 Query 66560 CGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTT 66619 |||||||||||| ||| || |||| || ||||||||| | ||||| ||||| | Sbjct 14226 CGAGAAGATCGG---CGTCTTCTTCGGCTCGCCCGAGACCACTGCCGGCGGGAAGGCGCT 14282 Query 66620 GAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 66679 | ||||||||| || || ||| | || |||| ||||||| || |||||| || Sbjct 14283 CAAGTTCTACGCGTCGGTACGCCTCGACATCCGCCGCATCGAGACGCTGAAGGACGGTAC 14342 Query 66680 TGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCA 66739 || || ||||| |||||||| || || |||||||||||||||||| |||| ||||| Sbjct 14343 CGACGCGGTCGGTAACCGCACTCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTT 14402 Query 66740 CCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAA--CTC 66797 | | || |||||| | || ||| ||| |||||||||||| || | ||| ||| Sbjct 14403 CAAGCAGGCGGAGTTCGACATCCTGTTCGGCACGGGCATCTCGCGCGAAG--GAAGCCTC 14460 Query 66798 CTCGACCTGGCCGTGTC--GCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66855 ||||| | | ||||| ||| ||| | || ||||||||||| ||||||| || |||| Sbjct 14461 ATCGACTT--CGGTGTCGAGCACGGCATCGTCAAGAAGTCGGGTGCCTGGTACACCTACG 14518 Query 66856 GGGACAAGAACGTCGCCCAGGGCAAG 66881 | | || | ||| ||||||||| Sbjct 14519 ACGGCGAGCAGCTCGGTCAGGGCAAG 14544 >seq240 Length=32197 Score = 336 bits (372), Expect = 1e-87 Identities = 549/788 (70%), Gaps = 7/788 (1%) Strand=Plus/Plus Query 66096 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 66155 |||||||| | | ||||||| ||| |||||| |||| || ||| | ||||| ||| Sbjct 30985 ACCGGCTCGCTGGGTCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCGTG 31044 Query 66156 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGC- 66214 |||||||||||||| || ||||| || || ||| | || ||| || || | ||||| Sbjct 31045 GTGGAAATCTACGGTCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGTCGTGGCT 31104 Query 66215 -CAATGCCCAGAAGGCCGGTGGCAACGCTGCCTACATCGACGCTGAGCACTCCCTGGACC 66273 |||| || ||| ||| |||| | |||| | ||||||| || ||| | |||||| Sbjct 31105 GAAATG--CAAAAGATCGGCGGCACCTGCGCCTTCGTCGACGCCGAACACGCGCTGGACG 31162 Query 66274 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 66333 |||||||| | ||| || || |||| | | |||| || | |||||||||| Sbjct 31163 TGCAGTACGCCTCGAAGCTGGGCGTCAACCTGGCCGACCTGCTGATCTCGCAGCCGGACA 31222 Query 66334 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 66393 | || |||||||| ||||| ||| ||| || || || || | | | | Sbjct 31223 CGGGTGAGCAGGCGCTGGAAATCACCGACGCGCTGGTGCGCTCGGGTTCGGTCGACCTGA 31282 Query 66394 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 66453 |||| || ||||| || |||||||||||||| ||||| |||||||||| || || | Sbjct 31283 TCGTGGTCGACTCGGTCGCGGCCCTGGTGCCCAAGGCCGAAATCGAAGGCGAAATGGGCG 31342 Query 66454 ACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCA 66513 | | ||||||||| || ||||| ||| ||||| |||||||||| |||| || Sbjct 31343 ATTCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCA 31402 Query 66514 CCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 66573 ||||| | |||||| || ||| |||||||| | ||| ||||||||| Sbjct 31403 CCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGG-- 31460 Query 66574 ACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCT 66633 |||| | |||| ||| |||||||| |||||||| || | | ||||||||||| Sbjct 31461 -CGTGATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACGCGCTCAAGTTCTACGCCT 31519 Query 66634 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 66693 | || ||| |||| |||| ||||||| | | ||| | ||||| |||| ||||||| Sbjct 31520 CGGTGCGCCTGGACATCCGCCGCATCGGCTCGATCAAGAAGGGCGACGAGGTCGTCGGCA 31579 Query 66694 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCGAGT 66753 || ||||| || ||||| |||||||||||| | || || ||| | | ||||||| Sbjct 31580 ACGAAACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCGCCCCCGTTCAAGCAGGCCGAGT 31639 Query 66754 TCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGT 66813 || | || ||||||| | ||||||||||| || | |||| || ||||||||| |||| Sbjct 31640 TCGACATCATGTACGGCGCCGGCATCTCGCGCGAAGGCGAAATCATCGACCTGGGCGTGG 31699 Query 66814 CGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCCC 66873 | | ||||| | ||||| ||||| |||| || ||| | ||| | ||| || Sbjct 31700 CCGCCAACGTGGTGGACAAGTCCGGCGCGTGGTACAGCTACAACGGCAACCGCATCGGCC 31759 Query 66874 AGGGCAAG 66881 |||||||| Sbjct 31760 AGGGCAAG 31767 >seq5 Length=148305 Score = 102 bits (112), Expect = 4e-17 Identities = 208/303 (69%), Gaps = 11/303 (4%) Strand=Plus/Minus Query 59478 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCG 59537 |||| |||| ||| || ||||||||||||||||||| ||| || |||| | |||||| Sbjct 31288 TCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAGAACGGGCTGCCCGTCG 31229 Query 59538 CCAACTTCACCGTCGTGTCCAACGAACGCCGC-CG--CGACGCCCAGGGCAAC---TGGG 59591 | ||||||||| ||| ||| | | | |||| || |||| |||| ||| ||| Sbjct 31228 CGAACTTCACCATCGCGTCGACC---CCCCGCACGTTCGACCGTCAGGCGAACGAGTGGA 31172 Query 59592 TCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAG 59651 |||||||| ||| ||||| || | ||||||| || ||||||| |||| | Sbjct 31171 AGGACGGCGAGGCCCTGTTCCTGCGGGCGTCGGTCTGGCGTGAGTTCGCCGAGCACGTGG 31112 Query 59652 CGGAAAGCCTCCAGAAAGGCCAG-CGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCC 59710 ||| || | |||| ||| || ||||||| | || || ||||||||| Sbjct 31111 CGGGTTCGCT-GACCAAGGGCAGCCGTGTCATCGCGACCGGTCGTCTGCGTCAGCGCTCC 31053 Query 59711 TTCGAGACCAAGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGC 59770 | | || | || || | | ||||||| |||||| | ||||| |||||||||||| Sbjct 31052 TACCAGGACCGTGACGGGCAGACCCGCACCGCCATCGAACTCGAGGTGGACGAGATCGGC 30993 Query 59771 CCG 59773 ||| Sbjct 30992 CCG 30990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240936509336700