Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7728 167 5e-36 seq1176 116 9e-21 seq1162 113 1e-19 seq12 111 4e-19 seq73 107 4e-18 seq585 105 2e-17 seq1233 98.7 2e-15 seq1545 89.7 1e-12 seq3338 84.2 5e-11 seq355 84.2 5e-11 >seq7728 Length=1087 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | |||||||| || || ||||| || |||| ||| || | || || Sbjct 259 AGAACCAGGTGCAATGTGGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTGCGGCCGTCC 200 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| ||||| || || ||||| || | |||||||||||| Sbjct 199 TCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCAGGGGGGATCCCTTCCTTGTCC 140 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||||| ||||| || ||||| ||||| | ||||| || || ||||| ||| Sbjct 139 TGGATCTTTTGCTTCACATTCTCGATTGTGTCGCTGGGCTCAACATCTAGGGTGATGGTC 80 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | |||||| Sbjct 79 TTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 48 >seq1176 Length=13603 Score = 116 bits (128), Expect = 9e-21 Identities = 99/122 (81%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || || ||||| | ||||| Sbjct 12510 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCC 12569 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || || || ||||| || ||||||||||||| || ||||||||| Sbjct 12570 TCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 12629 Query 211023 TG 211024 || Sbjct 12630 TG 12631 Score = 107 bits (118), Expect = 4e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || || ||||| | ||||| Sbjct 13269 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCC 13328 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || || || ||||| || |||||||| || | || ||||||||| Sbjct 13329 TCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 13388 Query 211023 TG 211024 || Sbjct 13389 TG 13390 >seq1162 Length=13745 Score = 113 bits (124), Expect = 1e-19 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| ||||||||||| || || || ||||| | ||||| Sbjct 13621 AGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCC 13680 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || ||||| ||||||| || ||||||||| Sbjct 13681 TCAAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 13740 Query 211023 TGGAT 211027 || || Sbjct 13741 TGCAT 13745 >seq12 Length=84225 Score = 111 bits (122), Expect = 4e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || |||||||| ||||||||||| || || || ||||| | ||||| Sbjct 61 AGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCC 120 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || ||||| ||||||| || ||||||||| Sbjct 121 TCAAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 180 Query 211023 TGGATC 211028 || ||| Sbjct 181 TGCATC 186 >seq73 Length=47289 Score = 107 bits (118), Expect = 4e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| ||||||||||| |||||| | || || || ||||| | ||||| Sbjct 32415 AGTACCAGGTGAAGCGTGGACTCTTTCTGGATGCTGTAGTCGGCCAGGGTGCGGCCATCC 32474 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| | |||||| | ||| || ||||| ||||| | || ||||||||| Sbjct 32475 TCAAGCTGCTTGCCCGTGAAGATTAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 32534 Query 211023 TG 211024 || Sbjct 32535 TG 32536 >seq585 Length=20866 Score = 105 bits (116), Expect = 2e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || || ||||| | ||||| Sbjct 686 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCC 745 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 |||||||||||||| || || || ||||| || ||||||||||||| |||| Sbjct 746 TCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGGAATTCCT 796 >seq1233 Length=13172 Score = 98.7 bits (108), Expect = 2e-15 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||||||||||| |||||||| ||||| |||||||| | || || Sbjct 13076 AGCACCAGGTGCAGCGTGGACTCTTTCTGGATGTTGTAATCGGCAAGGGTGCGGCCGTCC 13135 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGT 210999 |||||||||||||| || ||||| ||||| || |||| Sbjct 13136 TCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGT 13172 >seq1545 Length=10919 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||| ||||| ||||| || ||||| ||||| || || |||||| Sbjct 10655 CCCTCCTTGTCCTGAATCTTAGCCTTCACATTCTCGATTGTGTCTGAAGACTCCACCTCG 10596 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||||||||| |||||||| ||||| || || | |||||| Sbjct 10595 AGGGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 10552 >seq3338 Length=4919 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| ||||| || ||||| | ||||| Sbjct 4831 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGCCAGGGTGCGGCCATCC 4890 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCG 210991 || ||||||||||| || ||||| ||||| Sbjct 4891 TCAAGCTGCTTGCCCGCAAAGATGAGGCG 4919 >seq355 Length=26549 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || |||||||| |||||||| ||||| || ||||||||||| ||| || || || Sbjct 18176 CCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCGCTGCTCTCCACTTCA 18117 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| |||||||| ||||| ||||| | ||||| Sbjct 18116 AGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATTTGCAT 18073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159033201771635